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. Author manuscript; available in PMC: 2022 Aug 13.
Published in final edited form as: Nat Protoc. 2022 Feb 4;17(2):445–475. doi: 10.1038/s41596-021-00651-w
Parameter Setting
Duplicates ≤ 2*
Blat Density ≤ 40
G/C Content (%) ≤ 60
Repeats False
*

Often interactions at duplicated genes, e.g. HBA1, HBA2, can still be understood.