Table 1. Characteristics of the A. capillus-veneris genome.
Genome | ||
Size (Gb) | 4.83 | |
Contig N50 (Mb) | 16.22 | |
Contig number | 2,081 | |
Sequence anchored on chromosome (%) | 98.8 | |
Gap number | 928 | |
Gap ratio (%) | 0.26 | |
GC content (%) | 41.71 | |
High-copy repeat content (%) | 85.25 | |
Protein-coding gene | Average | |
Gene length (bp) | 23,212 | |
CDS length (bp) | 1,150 | |
Exon length (bp) | 284 | |
Intron length (bp) | 4,844 | |
Exon number per gene | 5.01 | |
Gene number | 31,244 | |
Noncoding loci | Number | Total (bp) |
lncRNA | 6,541 | 10,447,168 |
miRNA | 80 | 8,405 |
tRNA | 1,624 | 120,735 |
rRNA | 540 | 491,460 |