Table 1. Phosphorylation sites within LIR domains of mammalian proteins.

Protein	LIR domain	Residue (kinase/phosphatase, if known)	References
AMBRA1	EALNSGVEYYWDQLNETVFTVHSN	S1014 (IKKβ)	[165]
ATG4B	ERFFDSEDEDFEILSL	S249	[94,197]
Beclin 1	RMMSTESANSFTLIGEASDGGTME	S90 (MAPKAPK2, MAPKAPK3, DAPK/PPP2); S93, S96 (AMPK)	[96,198–200]
BNIP3	GMQEESLQGSWVELHFSNNGNGGS	S13; S17 (ULK1), S24	[170,201]
NIX/BNIP3L	LPPPAGLNSSWVELPMNSSNGNDN	S34; S35 (ULK1)	[132,201]
FAM134C	SSDLDTDAEGDDFEELDQSELSQLDP	S435, S436, T440 (CK2)	[178]
FUNDC1	PQDYESDDDSYEVLDLTEYARRHQ	S13 (CK2, PGAM5), S17 (ULK1), Y18 (PGAM5)	[175,176,202]
OPTN	LNSSGSSEDSFVEIRMAEGEAEGS	S170, S171, S173, S174; S177 (TBK1)	[109,167]
SCOC	SRKEEEEDSTFTNISLADDIDHSS	S12, T13, T15, S18	[168]
TEX264	YSESGASGSSFEELDLEGEGPLGE	S266, S269, S271, S272 (CK2)	[164]
TNIP1	KPPSSGTSSEFEVVTPEEQNSPES	S122, S123 (TBK1)	[169],[203]