Skip to main content
. Author manuscript; available in PMC: 2024 Feb 15.
Published in final edited form as: Mol Cell. 2023 Jul 26;83(16):2925–2940.e8. doi: 10.1016/j.molcel.2023.06.031
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
anti-RPA70 Abcam Cat# ab79398; RRID: AB_1603759
anti-BRCA2 Merck Cat# OP95-100UG; RRID: AB_213443
anti-BRCA2 (aa 188-563) Abcam Cat# ab97; RRID: AB_296572
anti-BRCA2 (aa 1651-1821) Oncogene (now Millipore) Cat# OP95; RRID: AB_2067762
Anti-GFP Roche Cat# 11814460001; RRID: AB_390913
Anti-FLAG M2 Sigma-Aldrich Cat# F1804-50UG; RRID: AB_262044
anti-RAD51 Abcam Cat# ab213; RRID: AB_302856
Goat anti-Mouse IgG (H+L) Highly Cross-AdsorbedSecondary Antibody, Alexa Fluor Plus 800 Thermo Fisher Cat# A32730; RRID: AB_2633279
Goat anti-Rabbit IgG (H+L) Highly Cross-AdsorbedSecondary Antibody, Alexa Fluor Plus 680 Thermo Fisher Cat# A32734; RRID: AB_2633283
Bacterial and virus strains
E. coli BLR(DE3)pLysS Novagen Cat# 69956-3
E. coli DH5alpha NEB Cat# C2987H
Chemicals, peptides, and recombinant proteins
Ampicillin, Sodium Salt Merck Cat# 171254
Chloramphenicol Merck Cat# 220551
IPTG, Dioxane-Free, High Purity Merck Cat# 420322
Halt™Protease and Phosphatase Inhibitor Cocktail Thermo Fisher Cat# 78440
anti-FLAG M2 resin Merck Cat# A2220
Econo-Pac gravity flow column BioRad Cat# 7321010
SP Sepharose Big Beads, 1 L Cytiva Cat# 17065703
Bio-Rad Protein Assay Dye Reagent Concentrate BioRad Cat# 5000006
Insect-XPRESS™Protein-free Insect Cell Medium Lonza Cat# BELN12-730Q
Sf-900™II SFM Thermo Fisher Cat# 10902088
DENARASE, 500 kU c-LEcta Cat# 20804-500k
Superdex 200 Increase GL10/300 column GE Healthcare Cat# 28-9909-44
Slide-A-Lyzer MINI dialysis units Thermo Fisher Cat# 96570
VivaSpin 500 centrifugal concentrator Sartorius Cat# VS0121
MaxiGeBaFlex dialysis tube Generon Cat# D045
β-mercaptoethanol Sigma-Aldrich Cat# 101458612
guanidine hydrochloride Sigma-Aldrich Cat# 50940
TCEP (tris(2-carboxyethyl)phosphine) Sigma-Aldrich Cat# 646547
StrepTrap HP column (1 ml) Cytiva Cat# 28907546
HiTrap Heparin HP column (5 ml) Cytiva Cat# 17040703
HisTrap HP column (1 ml) Cytiva Cat# 17524701
HiTrap Q HP column (1ml) Cytiva Cat# 17115301
HiTrap SP HP column (1ml) Cytiva Cat# 29051324
100 kDa MWCO Amicon centrifugal filter Millipore Cat# Z648043-24EA
HiTrap Heparin HP column (1 ml) Cytiva Cat# 17040601
HiTrap Q FF column (5 ml) Cytiva Cat# 17515601
RESOURCE Q anion exchange chromatography column Cytiva Cat# 17117701
Mono Q 5/50 GL Cytiva Cat# 17516601
Alexa Fluor 647 C2 maleimide Thermo Fisher Cat# A20347
Vivaspin centrifugal concentrator (30 kDa MWCO) Merck Cat# Z614246-25EA
Zeba Spin Desalting Columns, 7K MWCO, 0.5 mL Thermo Fisher Cat# 89882
Streptavidin Mag Sepharose Cytiva Cat# 28985799
Sodium hypochlorite Merck Cat# XX0637
Sodium thiosulfate Merck Cat# 106512
PLURONIC F-127 Merck Cat# P2443-250G
Albumin from bovine serum Sigma-Aldrich Cat# A7030
HiTrap Heparin HP 1 mL column Merck Cat# GE17-0407-01
Streptavidin-coated polystyrene particles 0.5% w/v Spherotech Cat# SVP-40-5
Ni-NTA agarose resin Qiagen Cat# 30210
Lambda DNA Thermo Fisher Cat# SD0011
Recombinant X. laevis histones The Histone Source, Protein Expression and Purification Facility, Colorado State University N/A
RAD51 This study N/A
RAD51(A647) This study N/A
hRPA This study N/A
BRCA2 This study N/A
BRCA2-eGFP This study N/A
BRCA2-N This study N/A
BRCA2-C This study N/A
BRCA2-C2 This study N/A
T4 Polynucleotide Kinase NEB Cat#M0201S
T4 DNA Ligase NEB Cat# M0202S
T4 DNA Ligase Reaction Buffer NEB Cat# B0202S
SYTOX Orange Nucleic Acid Stain Thermo Fisher Cat#S11368
S. p. Cas9 D10A nickase IDT Cat# 1081062
EDTA-free cOmplete protease inhibitor cocktail Roche Cat# COEDTAF-RO
PhosSTOP phosphatase inhibitor cocktail Roche Cat# PHOSS-RO
4x NuPAGE LDS sample buffer Themo Fisher Cat# NP0008
Clarity Western ECL Bio-Rad Cat# 1705061
Clarity Max Western ECL Bio-Rad Cat# 1705062
Critical commercial assays
QIAquick PCR Purification Kit Qiagen Cat# 28104
Q5 Site-Directed Mutagenesis Kit New England BioLabs Cat# E0554
Deposited data
Original images with cropped areas marked Mendeley Mendeley: https://doi.org/10.17632/sgw9t49xyg.1
Original code for kymograph/image analysis Zenodo Zenodo: https://doi.org/10.5281/zenodo.7857347
Experimental models
Spodoptera frugiperda (Sf9) insect cells Crick Cell Services N/A
Trichoplusia ni High Five (BTI-TN-5B1-4) insect cells Thermo Fisher Cat# B85502
Oligonucleotides
Oligonucleotides are listed in Table S1 IDT and Sigma Aldrich Table S1
Recombinant DNA
pFBDM-BRCA2-N This study N/A
pFBDM-BRCA2-C This study N/A
pFBDM-BRCA2-C2 This study N/A
pFB-BRCA2 This study N/A
pFB-BRCA2-eGFP This study N/A
pBIG1a-hRFA1/hRFA2/hRFA3-his10 This study N/A
pET11c-RAD51 Dr. Lumir Krejci N/A
pET11c-RAD51 C319S This study N/A
pFastBac1-hRFA1 This study N/A
pFastBac1-hRFA2 This study N/A
pFastBac1-hRFA3-his10 This study N/A
Software and algorithms
GraphPad Prism 9 Graphpad https://www.graphpad.com/scientific-software/prism/
Fiji Open source https://imagej.net/Fiji
Matlab R2018b (9.5.0) MathWorks https://uk.mathworks.com
Lumicks Pylake Python package from Lumicks https://lumicks-pylake.readthedocs.io/en/latest/index.html#
Other
C-trap optical trapping and confocal microscopy setup Lumicks N/A