Antibodies |
anti-RPA70 |
Abcam |
Cat# ab79398; RRID: AB_1603759 |
anti-BRCA2 |
Merck |
Cat# OP95-100UG; RRID: AB_213443 |
anti-BRCA2 (aa 188-563) |
Abcam |
Cat# ab97; RRID: AB_296572 |
anti-BRCA2 (aa 1651-1821) |
Oncogene (now Millipore) |
Cat# OP95; RRID: AB_2067762 |
Anti-GFP |
Roche |
Cat# 11814460001; RRID: AB_390913 |
Anti-FLAG M2 |
Sigma-Aldrich |
Cat# F1804-50UG; RRID: AB_262044 |
anti-RAD51 |
Abcam |
Cat# ab213; RRID: AB_302856 |
Goat anti-Mouse IgG (H+L) Highly Cross-AdsorbedSecondary Antibody, Alexa Fluor Plus 800 |
Thermo Fisher |
Cat# A32730; RRID: AB_2633279 |
Goat anti-Rabbit IgG (H+L) Highly Cross-AdsorbedSecondary Antibody, Alexa Fluor Plus 680 |
Thermo Fisher |
Cat# A32734; RRID: AB_2633283 |
Bacterial and virus strains |
E. coli BLR(DE3)pLysS |
Novagen |
Cat# 69956-3 |
E. coli DH5alpha |
NEB |
Cat# C2987H |
Chemicals, peptides, and recombinant proteins |
Ampicillin, Sodium Salt |
Merck |
Cat# 171254 |
Chloramphenicol |
Merck |
Cat# 220551 |
IPTG, Dioxane-Free, High Purity |
Merck |
Cat# 420322 |
Halt™Protease and Phosphatase Inhibitor Cocktail |
Thermo Fisher |
Cat# 78440 |
anti-FLAG M2 resin |
Merck |
Cat# A2220 |
Econo-Pac gravity flow column |
BioRad |
Cat# 7321010 |
SP Sepharose Big Beads, 1 L |
Cytiva |
Cat# 17065703 |
Bio-Rad Protein Assay Dye Reagent Concentrate |
BioRad |
Cat# 5000006 |
Insect-XPRESS™Protein-free Insect Cell Medium |
Lonza |
Cat# BELN12-730Q |
Sf-900™II SFM |
Thermo Fisher |
Cat# 10902088 |
DENARASE, 500 kU |
c-LEcta |
Cat# 20804-500k |
Superdex 200 Increase GL10/300 column |
GE Healthcare |
Cat# 28-9909-44 |
Slide-A-Lyzer MINI dialysis units |
Thermo Fisher |
Cat# 96570 |
VivaSpin 500 centrifugal concentrator |
Sartorius |
Cat# VS0121 |
MaxiGeBaFlex dialysis tube |
Generon |
Cat# D045 |
β-mercaptoethanol |
Sigma-Aldrich |
Cat# 101458612 |
guanidine hydrochloride |
Sigma-Aldrich |
Cat# 50940 |
TCEP (tris(2-carboxyethyl)phosphine) |
Sigma-Aldrich |
Cat# 646547 |
StrepTrap HP column (1 ml) |
Cytiva |
Cat# 28907546 |
HiTrap Heparin HP column (5 ml) |
Cytiva |
Cat# 17040703 |
HisTrap HP column (1 ml) |
Cytiva |
Cat# 17524701 |
HiTrap Q HP column (1ml) |
Cytiva |
Cat# 17115301 |
HiTrap SP HP column (1ml) |
Cytiva |
Cat# 29051324 |
100 kDa MWCO Amicon centrifugal filter |
Millipore |
Cat# Z648043-24EA |
HiTrap Heparin HP column (1 ml) |
Cytiva |
Cat# 17040601 |
HiTrap Q FF column (5 ml) |
Cytiva |
Cat# 17515601 |
RESOURCE Q anion exchange chromatography column |
Cytiva |
Cat# 17117701 |
Mono Q 5/50 GL |
Cytiva |
Cat# 17516601 |
Alexa Fluor 647 C2 maleimide |
Thermo Fisher |
Cat# A20347 |
Vivaspin centrifugal concentrator (30 kDa MWCO) |
Merck |
Cat# Z614246-25EA |
Zeba Spin Desalting Columns, 7K MWCO, 0.5 mL |
Thermo Fisher |
Cat# 89882 |
Streptavidin Mag Sepharose |
Cytiva |
Cat# 28985799 |
Sodium hypochlorite |
Merck |
Cat# XX0637 |
Sodium thiosulfate |
Merck |
Cat# 106512 |
PLURONIC F-127 |
Merck |
Cat# P2443-250G |
Albumin from bovine serum |
Sigma-Aldrich |
Cat# A7030 |
HiTrap Heparin HP 1 mL column |
Merck |
Cat# GE17-0407-01 |
Streptavidin-coated polystyrene particles 0.5% w/v |
Spherotech |
Cat# SVP-40-5 |
Ni-NTA agarose resin |
Qiagen |
Cat# 30210 |
Lambda DNA |
Thermo Fisher |
Cat# SD0011 |
Recombinant X. laevis histones |
The Histone Source, Protein Expression and Purification Facility, Colorado State University |
N/A |
RAD51 |
This study |
N/A |
RAD51(A647) |
This study |
N/A |
hRPA |
This study |
N/A |
BRCA2 |
This study |
N/A |
BRCA2-eGFP |
This study |
N/A |
BRCA2-N |
This study |
N/A |
BRCA2-C |
This study |
N/A |
BRCA2-C2 |
This study |
N/A |
T4 Polynucleotide Kinase |
NEB |
Cat#M0201S |
T4 DNA Ligase |
NEB |
Cat# M0202S |
T4 DNA Ligase Reaction Buffer |
NEB |
Cat# B0202S |
SYTOX Orange Nucleic Acid Stain |
Thermo Fisher |
Cat#S11368 |
S. p. Cas9 D10A nickase |
IDT |
Cat# 1081062 |
EDTA-free cOmplete protease inhibitor cocktail |
Roche |
Cat# COEDTAF-RO |
PhosSTOP phosphatase inhibitor cocktail |
Roche |
Cat# PHOSS-RO |
4x NuPAGE LDS sample buffer |
Themo Fisher |
Cat# NP0008 |
Clarity Western ECL |
Bio-Rad |
Cat# 1705061 |
Clarity Max Western ECL |
Bio-Rad |
Cat# 1705062 |
Critical commercial assays |
QIAquick PCR Purification Kit |
Qiagen |
Cat# 28104 |
Q5 Site-Directed Mutagenesis Kit |
New England BioLabs |
Cat# E0554 |
Deposited data |
Original images with cropped areas marked |
Mendeley |
Mendeley: https://doi.org/10.17632/sgw9t49xyg.1
|
Original code for kymograph/image analysis |
Zenodo |
Zenodo: https://doi.org/10.5281/zenodo.7857347
|
Experimental models |
Spodoptera frugiperda (Sf9) insect cells |
Crick Cell Services |
N/A |
Trichoplusia ni High Five (BTI-TN-5B1-4) insect cells |
Thermo Fisher |
Cat# B85502
|
Oligonucleotides |
Oligonucleotides are listed in Table S1 |
IDT and Sigma Aldrich |
Table S1 |
Recombinant DNA |
pFBDM-BRCA2-N |
This study |
N/A |
pFBDM-BRCA2-C |
This study |
N/A |
pFBDM-BRCA2-C2 |
This study |
N/A |
pFB-BRCA2 |
This study |
N/A |
pFB-BRCA2-eGFP |
This study |
N/A |
pBIG1a-hRFA1/hRFA2/hRFA3-his10
|
This study |
N/A |
pET11c-RAD51 |
Dr. Lumir Krejci |
N/A |
pET11c-RAD51 C319S |
This study |
N/A |
pFastBac1-hRFA1 |
This study |
N/A |
pFastBac1-hRFA2 |
This study |
N/A |
pFastBac1-hRFA3-his10
|
This study |
N/A |
Software and algorithms |
GraphPad Prism 9 |
Graphpad |
https://www.graphpad.com/scientific-software/prism/
|
Fiji |
Open source |
https://imagej.net/Fiji
|
Matlab R2018b (9.5.0) |
MathWorks |
https://uk.mathworks.com
|
Lumicks Pylake |
Python package from Lumicks |
https://lumicks-pylake.readthedocs.io/en/latest/index.html#
|
Other |
C-trap optical trapping and confocal microscopy setup |
Lumicks |
N/A |