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. Author manuscript; available in PMC: 2024 Apr 2.
Published in final edited form as: Cell Rep. 2022 May 3;39(5):110790. doi: 10.1016/j.celrep.2022.110790
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rabbit anti-MAP2 Abcam Ab32454; RRID: AB_776174
Rabbit anti-VGAT Synaptic Systems 131013; RRID: AB_2189938
Rabbit anti-Phospho-CREB Cell Signaling 9198; RRID: AB_2561044
Rabbit anti-CREB Cell Signaling 9197S; RRID: AB_331277
Rabbit anti-GAPDH Cell Signaling 2118S; RRID: AB_561053
Rabbit anti-H3K4me3 Abcam Ab32356; RRID: AB_732924
Rabbit anti-GABA Sigma-Aldrich A0310; RRID: AB_476667
Mouse anti-SET1A Santa Cruz SC-515590; RRID: N/A
Mouse anti-γ-tubulin Sigma-Aldrich T5326; RRID: AB_532292
Mouse anti-Gephyrin Synaptic Systems 147011; RRID: AB_887717
Guinea pig anti-Synapsin 1/2 Synaptic Systems 106004; RRID: AB_1106784
Goat anti-rabbit IgG Invitrogen G-21234; RRID: AB_2536530
Goat anti-mouse IgG Jackson Immuno
Research Laboratories
115-035-062; RRID: AB_2338504
Goat-anti rabbit Alexa 568 Invitrogen A11036; RRID: AB_10563566
Goat-anti-mouse Alexa 488 Invitrogen A11029; RRID: AB_2534088
Goat anti-guinea pig Alexa Fluor 568 Invitrogen A11075; RRID: AB_2534119
Goat anti-guinea pig Alexa Fluor 647 Invitrogen A21450; RRID: AB_141882
Bacterial and virus strains
AAV2-hSyn-mCherry UNC Vector Core AV5033E
Chemicals, peptides, and recombinant proteins
Accutase GIBCO A11105-01
B27 Supplement GIBCO 0080085SA
Cytosine β-D-arabinofuranoside (Ara-C) Sigma-Aldrich C1768-100MG
BDNF, human recombinant Promokine C66212
DAKO fluorescent mounting medium DAKO S3023
DMEM/F12 GIBCO 11320–074
Doxycycline Sigma-Aldrich D9891-5G
DPBS GIBCO 14190–094
E8 Basal Medium GIBCO A1517001
Fetal Bovine Serum (FBS) Sigma-Aldrich F2442-500ML
Fluo-8-AM Abcam Ab142773
Forskolin Sigma-Aldrich F6886
G418 Sigma-Aldrich 4727878001
GlutaMAX GIBCO 35050061
Hoechst 33342 Thermo-Fisher H3570 N/A
H89 Tocris 2910
KT5720 Tocris 1283
Matrigel Corning 356237
Non-essential amino acid solution NEAA Sigma-Aldrich M7145
N2 GIBCO 17502–048
Neurobasal Medium GIBCO 21103–049
NT-3, human recombinant Promokine C66425
ORY1001 SelleckChem RG6016
Penicillin/Streptomycin Sigma-Aldrich P4333
Poly-L-ornithine hydrobromide (PLO) Sigma-Aldrich P3655-10MG
Primocin Invivogen ANT-PM-05
Puromycin Invivogen ANT-PR-1
Picrotoxin Tocris 1128
Recombinant Human Laminin LN521 Biolamina 2021–21
RevitaCell Thermo-Fisher A2644501
ReLeSR Stem Cell Technologies 058072
SQ22536 Sigma-Aldrich S153
Triton X-100 Sigma-Aldrich 9002-93-1
Critical commercial assays
24-well MEA system Multichannel Systems, MCS GmbH, Reutlingen, Germany N/A
Zeiss Axio Imager Z1 Olympus Zeiss https://www.zeiss.com/
Multiclamp 700B amplifier Molecular Devices, Wokingham, United Kingdom https://www.moleculardevices.com/
cAMP ELISA kit Abcam Ab133051
BCA protein assay kit Thermo-Fisher 23225
iMark™ Microplate Absorbance Reader Bio-Rad N/A
Deposited data
RNA-seq This paper GEO: GSE180648
Code This paper Zenodo: https://doi.org/10.5281/zenodo.6409947
Experimental models: Human iPSC lines
CTR-WTC Corielll Institute https://www.coriell.org/0/Sections/Search/Sample_Detail.aspx?Ref=GM25256&Product=CC
WTC-CRISPR-clone 1 Generated in this study N/A
WTC-CRISPR-clone 2 Generated in this study N/A
CTR-WTC-Ngn2/rtTA Generated in this study N/A
CTR-WTC-Ascl1/rtTA Generated in this study N/A
WTC-CRISPR-clone 1- Ngn2/rtTA Generated in this study N/A
WTC-CRISPR-clone 1- Ascl1/rtTA Generated in this study N/A
WTC-CRISPR-clone 2- Ngn2/rtTA Generated in this study N/A
WTC-CRISPR-clone 2- Ascl1/rtTA Generated in this study N/A
CTR-409b2 Yamanaka, Shinya / RIKEN BRC Generated HPS0076; 409B2; RRID: CVCL_K092
409b2-CRISPR Generated in this study N/A
CTR-409b2- Ngn2/rtTA Generated in this study N/A
CTR-409b2- Ascl1/rtTA Generated in this study N/A
409b2-CRISPR- Ngn2/rtTA Generated in this study N/A
409b2-CRISPR- Ascl1/rtTA Generated in this study N/A
Experimental models: Organisms/strains
Wistar WT Rat (Dissociated astrocytes) Charles River N/A
Recombinant DNA
Lentivirus psPAX2 packaging vector Lentivirus psPAX2 was a gift from Didier Trono RRID: Addgene_12260; http://addgene.org/12260
Lentivirus VSVG envelope glycoprotein vector pMD2-G pMD2.G was a gift from Didier Trono RRID: Addgene_12259; http://addgene.org/12259
pSpCas9(BB)-2A-Puro (PX459) Addgene 62988
pLVX-EF1α-(Tet-On-Advanced)-IRES-G418(R) lentiviral vector Mossink et al., 2021 N/A
pLVX-(TRE-thight)-(MOUSE) Ngn2-PGK-Puromycin(R) lentiviral vector Mossink et al., 2021 N/A
pLV[TetOn]-Puro-TRE > mAscl1 lentiviral vector Mossink et al., 2021 N/A
Software and algorithms
GraphPad Prism GraphPad software https://www.graphpad.com/scientific-software/prism/; RRID:SCR_002798
Fiji National Institutes of Health https://imagej.nih.gov/ij/download.html
RRID: SCR_003070
ClampfitV 10.2 Molecular Devices, LLC., CA, USA RRID: SCR_011323
MATLAB 2014b Mathworks RRID: SCR_001622
Multiwell Analyzer Multichannel Systems, MCS GmbH, Reutlingen, Germany N/A
Neurolucida 360 MBF-Bioscience, Williston, ND, USA RRID: SCR_016788
Image lab Bio-Rad https://www.bio-rad.com/en-nl/product/image-lab-software/