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. Author manuscript; available in PMC: 2024 Nov 19.
Published in final edited form as: Cell. 2024 Sep 13;187(21):5967–5980.e17. doi: 10.1016/j.cell.2024.08.024
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
AT8 (1:250) ThermoFisher Cat# MN1020
AT8-Biotin (1:1000) ThermoFisher Cat# MN1020B
pS422 (1:400) ThermoFisher Cat# 44-764-G
HT7 (1:1000) ThermoFisher Cat# MN1000
Pan-tau (1:2000) DAKO Cat# A0024
NeuN (1:500) Abcam Cat# Ab177487
FK2 (1:500) Merck Cat# 04-263
GAPDH (1:2000) Cell Signaling Technology Cat# 14C10
CypB (1:500) Santa Cruz Biotechnology Cat# Sc-130626
β-actin (1:2000) Santa Cruz Biotechnology Cat# Sc-47778
β-III-tubulin (1:500) Abcam Cat# Ab78078
P62 (1:1000) ThermoFisher Cat# PA5-20839
MAP2 (1:1000) Abcam Cat# Ab5392
GFP (Venus) – (1:1000) Proteintech Cat# 50430-2-AP
Anti-rabbit Alexa 488 (1:1000) ThermoFisher Cat# A-11008
Anti-rabbit Alexa 568 (1:1000) ThermoFisher Cat# A-11011
Anti-rabbit Alexa 647 (1:1000) ThermoFisher Cat# A-21245
Anti-mouse Alexa 488 (1:1000) ThermoFisher Cat# A-11001
Anti-mouse Alexa 568 (1:1000) ThermoFisher Cat# A-11031
Anti-mouse Alexa 647 (1:1000) ThermoFisher Cat# A-21235
Streptavidin Alexa 647 (1:1000) ThermoFisher Cat# S32357
Anti-mouse-HRP ThermoFisher Cat# A16066
Anti-rabbit-HRP ThermoFisher Cat# 65-6120
Bacterial and virus strains
BL-21 (DE3) Agilent Technologies Cat# 200131
Rosetta 2 DE3 Novagen Cat# 71397
XL Gold Ultracompetent Cells Agilent Cat# 200314
AAV PHP.eB Addgene Cat# 103005
AAV 9P31 Nonnenmacher et al.31 N/A
Chemicals, peptides, and recombinant proteins
T4455 Sigma-Aldrich Cat# T4455
MG132 Sigma-Aldrich Cat# M7449
NMS-873 Selleckchem Cat# S7285
TAK-243 Selleckchem Cat# S8341
PR-619 Sigma-Aldrich Cat# 662141
Bafilomycin Selleckchem Cat#S1413
0N4R P301S tau This paper N/A
0N4R P301S tau-RING This paper N/A
Biological samples
AD human brain Oxford Brain Bank N/A
PSP human brain Cambridge Brain Bank N/A
Deposited data
Bulk mass spectrometry data PRIDE PXD052897
Experimental models: Cell lines
HEK293T ATCC Cat# CRL-3216
TV cells McEwan et al.13 N/A
TVA cells This paper N/A
BHK cells ATCC Cat# [C-13]-CCL-10
Experimental models: Organisms/strains
Thy1-hTau.P301S mice (CBA.C57BL/6) M. Goedert laboratory Allen et al.30 Mouse strain: Tg2541
Recombinant DNA
pUCmini-iCAP-PHP.eB Addgene Cat# 103005
pAAV-CAG-GFP Addgene Cat# 37825
pAdDeltaF6 Addgene Cat# 112867
pMDG2 Addgene Cat# 12259
pCRV GagPol Mallery et al.47 N/A
pSMPPv2-Tau-RING This paper N/A
pSMPP-Tau-mCherry This paper N/A
pSMPPv2-Tau-mCherry-RING This paper N/A
pSMPPv2-Nanobody-mCherry-RING This paper N/A
pSMPPv2-Tau-RING (M72E/I18R) This paper N/A
pOPTG-Tau-RING This paper N/A
pOPTG-Tau-RING (M72E/I18R) This paper N/A
AAV 9P31-hSyn-Venus-P2A-Tau-RING This paper N/A
AAV 9P31-hSyn-Venus-P2A-Tau-RING I18R/M72E This paper N/A
AAV PHP.eB-CAG-Venus This paper N/A
AAV PHP.eB-CAG-Venus-P2A-Tau-RING This paper N/A
Software and algorithms
DeepLabCut Mathis et al.33 https://github.com/DeepLabCut
ImageJ Schindelin et al.48 https://fiji.sc
BioRender BioRender https://biorender.com
Prism 10 Graphpad https://www.graphpad.com
Other
HisTrap FF GE Healthcare Cat# 17-5255-01
HisTrap HP GE Healthcare Cat# 17-5248-01
HiLoad 16/600 Superdex 200 GE Healthcare Cat# 28-9893-35
Amicon Ultra-15 concentrators Merck Millipore Cat# UFC901024
Amicon Ultra-100 concentrators Merck Millipore Cat# UFC910008
Lipofectmine 2000 ThermoFisher Cat# 11-668-027
OptiMEM Gibco Cat# 31985062
DMEM ThermoFisher Cat# 11995065
MES Buffer ThermoFisher Cat# B0002
MOPS Buffer ThermoFisher Cat# J62847-AP
NuPAGE LDS sample buffer Invitrogen Cat# NP0008
4X NuPAGE BisTris gel Invitrogen Cat# NP0323BOX
FuGENE6 Promega Cat# E2691
ECL substrate Merck Cat# WBKLS0500
Precision Plus Protein Kaleidoscope Ladder BioRad Cat# 1610395
PVDF membrane BioRad Cat# 1704272
CLARIOstar BMG Labtech CLARIOstar
NuPAGE Bis-Tris gel Invitrogen Cat# NP0323BOX
Protein kaleidoscope Ladder BioRad Cat# 1610395
Prolong Diamond Antifade Mountant ThermoFisher Cat# P36961
Glass coverslips ThermoFisher Cat# 18X18-1
Carbon Film Supported Copper Square Mesh Merck Cat# TEM-CF400-CU-TH
OCT Sakura Cat# 94-4583
Glycerol ThermoFisher Cat# 15514029
Ethylene Glycol ThermoFisher Cat# 29810
Iodixanol Sigma Cat# D1556-250
Benzonase Sigma Cat# E1014-25KU
Phenol Red Sigma Cat# P0290
QIAGEN Plasmid Mini Kit QIAGEN Cat# 12123
QIAGEN Plasmid Midi Kit QIAGEN Cat# 12143
QIAGEN Plasmid Maxi Kit QIAGEN Cat# 12162
PEG8000 VWR Cat# 71003-444
PEI Generon Cat# 24765-1
Optiseal Beckman tubes ThermoFisher Cat# 362183
Beckman 1.5 ml Polypropylene Tubes Beckman Coulter Cat# 356094
Goat Serum ThermoFisher Cat# 16210064
Fetal Bovine Serum ThermoFisher Cat# A5670701
Horse Serum Invitrogen Cat# 26050070
Paraformaldehyde ThermoFisher Cat# 047392.9M
Poly-D-Lysine Invitrogen Cat# A3890401
Poly-L-Lysine RnD Systems Cat# 3438-100-01
Neurobasal Plus Gibco Cat# A3582901
B-27 plus 50x supplement Gibco Cat# A35828-01
100x Glutamax Invitrogen Cat# 35050038
1% DNAse Sigma Cat# DN25-100MG
Hibernate-A ThermoFisher Cat# A1247501
Penicillin/Streptomycin Invitrogen Cat# 15140122
Heparin Sigma Cat# H0878
DTT Merck Cat# 10197777001
Thioflavin S Sigma Cat# T1892
Halt Protease and Phosphatase inhibitor ThermoFisher Cat# 78440