| Chemicals, peptides, and recombinant proteins |
| RNAscope Target Probe GFP |
Advanced Cell Diagnostics |
400281-C2 |
| RNAscope Target Probe Gad2 |
Advanced Cell Diagnostics |
439371-C3 |
| Tamoxifen |
Sigma-Aldrich |
T5648-1G |
| Critical commercial assays |
| RNAscope Fluorescent Multiplex Reagent Kit |
Advanced Cell Diagnostics |
320850 |
| Experimental models: Organisms/strains |
| Mouse: Cux2-CreERT2 |
The Jackson Laboratory |
RRID: IMSR_JAX:012243 |
| Mouse: Ai148: B6.Cg-Igs7tm148.1(tetO-GCaMP6f,CAG-tTA2)Hze /J |
The Jackson Laboratory |
RRID: IMSR_JAX:030328 |
| Software and algorithms |
| ScanImage |
Vidrio Technology |
https://vidriotechnologies.com/scanimage/
|
| MATLAB, 2018a, 2019a |
MathWorks |
https://uk.mathworks.com/products/matlab.html
|
| LabView |
National Instruments |
https://www.ni.com/en-gb/shop/labview.html
|
| Custom program for visual stimulation |
Voitov and Mrsic-Flogel, 2022
|
https://github.com/Ivan-Voitov/ViZi
|
| Suite2p |
Pachitariu et al., 2017
|
https://github.com/MouseLand/suite2p
|
| CellPose |
Stringer et al., 2021
|
https://github.com/MouseLand/cellpose
|
| CellReg |
Sheintuch et al., 2017
|
https://github.com/zivlab/CellReg
|
| ImageJ |
NIH |
https://imagej.nih.gov/ij
|
| Custom code for experiments |
This paper |
https://doi.org/10.5281/zenodo.6640207
|
| Custom code for data analysis with processed data |
This paper |
https://doi.org/10.5281/zenodo.6640217
|