Figure 5. p300i is invariably effective during early stages of resistance to BET inhibition.
A. Graphical schema of the experimental approach to induce and store cells at all stages of resistance to BETi in SKNO1 and OCI-AML3 cells.
B. Experimental approach to the assessment of transcriptional changes via RNASeq during the longitudinal scale of establishment of resistance to BETi. To avoid putative sequencing-related batch effects, these experiments were directly performed in conjunction with matched p300i-treated (24h) samples (shown with lower opacity). All RNASeq experiments were performed on 3 biological replicates that were raised from individual wells (altogether 24 RNASeq samples per model).
C.-D. Variance by non-supervised hierarchical clustering of the 100 most variable genes in DMSO, BETi_72h, IC50_r and IC90_r isogenic SKNO1 (5C) and OCI-AML3 (5D) cells.
E.-F. Assessment of cell proliferation of the indicated isogenic SKNO1 (5E) and OCI-AML3 (5F) cell lines after 72h (for SKNO1) and 120h (for OCI-AML3) of p300i treatment. Shown are mean percentages normalized to DMSO-treated controls and SD from 3 biological replicates.
