TABLE I.

Dimensional variables M ≡ mass, L ≡ length, and t ≡ time.

Name	Unit	Symbol
Angular frequency	t−1	ω
Avogadro constant	mol−1	$Ñ$
Bead diameter	L	d
Bead friction coefficient [Eq. (15)]	M/t	ζ
Capsid radius (see Figs. 4 and 8)	L	rc
Cartesian coordinates	L	x, y, z
Cartesian coordinates with respect to the center of mass	L	${\widehat{\delta }}_1,{\widehat{\delta }}_2,{\widehat{\delta }}_3$
Characteristic time for each virus particle suspension	s	λs
Characteristic time, zero-shear	t	λc
Complex viscosity [Eq. (36)]	M/Lt	η*
Density	M/L3	ρ
Edge vector pointing from adenovirus vertex i to vertex j	L	Eij
Element for Kronecker delta [Eq. (10)]	t−1	δ(s)
Energy values in molecular-scale systems	ML2/t2	kT
Intrinsic minus imaginary part of non-linear complex viscosity	L3/M	[η″]
Intrinsic real part of non-linear complex viscosity	L3/M	[η′]
Intrinsic zero-shear viscosity	L3/M	[η]0
Macromolecular center of mass [Eq. (5)]	L	R
Mass concentration	M/L3	c
Mass of each bead	M	mi
Minus imaginary part of non-linear complex viscosity [Eq. (35)]	M/Lt	η″
Moments of inertia [Eqs. (7)–(9)]	ML2	I1, I2, I3
Number of dumbbells per unit volume	1/L3	n
Peplomer bulb center radial position (see Fig. 8)	L	rp ≡ r$v$ − rb
Peplomer bulb radius (see Fig. 8)	L	rb
Polymer contribution to the stress tensor [Eqs. (21) and (33)]	M/Lt2	τp
Position vector of the ith bead and jth element with respect to the center of mass [Eq. (6)]	L	Rij
Position vector of the ith bead with respect to the center of mass [Eq. (6)]	L	Ri
Position vector of the ith bead [Eq. (5)]	L	ri
Position vector of adenovirus vertex i with respect to the center of mass	L	Vi
Real part of non-linear complex viscosity [Eq. (34)]	M/Lt	η′
Reduced angular frequency	M/L3	ωR
Relaxation time of rigid dumbbell [Eq. (16)]	t	λ0
Relaxation time of solution Eq. (14)	t	λ
Rotational diffusivity	s−1	Dr
Rotatory diffusivity	L2/t	Drot
Shear rate amplitude [Eq. (29)]	t−1	${\dot{\gamma }}^0$
Shear rate at specific time t′ [Eq. (21)]	t−1	$\dot{\gamma }$(t′)
Shear rate tensor [Eq. (29)]	t−1	$\dot{\mathbf{\gamma }}\left(t\right)$
Shear rate [Eq. (29)]	t−1	$\dot{\gamma }\left(t\right)$
Shear relaxation function [Eq. (10)]	M/Lt2	G(s)
Solvent viscosity	M/Lt	ηs
Specific time [Eq. (21)]	t	t′
Temperature	T	T
Time	t	t
Time difference	t	s ≡ t − t′
Total mass	M	M
Translational diffusivity	L2/t	Dtr
Virus radius (see Figs. 4 and 8)	L	r$v$ ≡ rp + rb
Viscosity, zero-shear	M/Lt	η0
Zero-shear first normal stress difference	M/L	Ψ0,1