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. 2020 Jun 29;48(14):7958–7972. doi: 10.1093/nar/gkaa532

Table 2.

Single-turnover deamination kinetics of ADAR2-R2D E488Q and dimerization mutants on D-site of the 5-HT2c-R substratea.

Enzymeb k obs (min−1)c k rel d
ADAR2-R2D E488Q 2.13 ± 0.30 1
ADAR2-R2D E488Q, T501A >3 -
ADAR2-R2D E488Q, W502A 0.12 ± 0.03 0.056
ADAR2-R2D E488Q, D503A 2.32 × 10−3 ± 0.76 × 10−3 0.001

a5-HT2c pre-mRNA substrate sequence as shown in Supplementary Table S1.

bADAR2-R2D reactions were carried out with 100 nM enzyme, 10 nM RNA substrate in 17 mM Tris pH 7.4, 60 mM KCl, 15.6 mM NaCl, 1.6 mM EDTA, 0.003% Nonidet P-40, 0.5 mM DTT, 1.0 μg/ml yeast tRNA (Torula), 160 units/ml RNasin.

c k obs was calculated by fitting the time course to the equation: [P]t = α[1 –ekobst] where [P]t is percent edited, α is the end point fitted to 95%, and kobs is the observed rate constant.

d k rel = kobs for mutant/kobs for ADAR2-R2D E488Q.