Table 1. R2 values for height (without refitting).
Model | Form | Size | |||
---|---|---|---|---|---|
(1) | Age + Sex | 0.5300 | 0.5260 | 0.5288 | 2 |
(2) | Age + Sex + 10 PCs | 0.5344 | 0.5304 | 0.5336 | 12 |
(3) | Strong Single SNP | 0.5364 | 0.5323 | 0.5355 | 13 |
(4) | 10K Combined | 0.5482 | 0.5408 | 0.5444 | 10,012 |
(5) | 100K Combined | 0.5833 | 0.5515 | 0.5551 | 100,012 |
(6) | Sequential LR | 0.7416 | 0.6596 | 0.6601 | 17,012 |
(7) | Lasso | 0.8304 | 0.6992 | 0.6999 | 47,673 |
(8) | Relaxed Lasso | 0.7789 | 0.6718 | 0.6727 | 13,395 |
(9) | Elastic Net | 0.8282 | 0.6991 | 0.6998 | 48,268 |