Table 3.
Population identification accuracy for codon aversion
Population | Total individuals | Number of clusters | Percent accuracy |
---|---|---|---|
East Asia | 504 | 26 | 95.0397 |
Africa | 661 | 94 | 85.9304 |
Europe | 503 | 216 | 57.2565 |
South Asia | 489 | 214 | 56.4417 |
America | 347 | 165 | 52.7378 |
Using an alignment-free phylogenomic algorithm that analyzes only codon aversion usages across a genome, individuals in the 1000 Genomes Projects were clustered in a phylogeny (i.e. similar to a pedigree). Cluster accuracy was determined based on the number of clusters (i.e. clades) of individuals belonging the same superpopulation, where a new cluster was formed when an individual from a different population was added to the cluster. The table shows the superpopulation, the number of individuals in that population, the number of clusters identified using the phylogenomic algorithm and the percent accuracy of the classification.