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. 2020 Oct 9;48(19):e114. doi: 10.1093/nar/gkaa829

Figure 2.

Figure 2.

Accuracy of read mapping in segmental duplications using simulated long-read data. Each curve shows the precision and recall of different alignment methods as a function of mapping quality thresholds. Dashed lines correspond to the original alignments, while the solid lines show the alignments resulting from realignment using DuploMap. (A) Comparison of Minimap2 (MM2), BLASR, Minimap2 + DuploMap and BLASR + DuploMap on simulated reads with a mean length of 8.5 kb. (B) Accuracy of Minimap2 (MM2) and Minimap2 + DuploMap on simulated reads with mean lengths of 20 and 50 kb.