TABLE 1.
Best fit models of cone length (cm) based on 65 Pinus strobiformis stands in Mexico and United States.
Method of variable selection | Machine learning algorithm | Independent variable | RMSE | MAE | R2 |
PLS | rf | GSP, WINP, SMRPB, Pseudotsuga menziesii, P. cooperi, Arbutus xalapensis | 1.755 | 1.477 | 0.890 |
PLS | brnn | GSP, WINP, SMRPB, Pseudotsuga menziesii, P. cooperi, Arbutus xalapensis | 1.832 | 1.514 | 0.867 |
ROC | lm | GSP, Pseudotsuga menziesii, MAT, SMRPB, P. arizonica, J. deppeana | 1.939 | 1.536 | 0.865 |
PLS | mlpWeightDecay | GSP, WINP, SMRPB, Pseudotsuga menziesii, P. cooperi, Arbutus xalapensis | 5.599 | 4.971 | 0.191 |
KW | avNNet | GSP, MAT, Pseudotsuga menziesii, P. strobiformis, P. arizonica, SMRPB | 17.852 | 17.125 | 0.658 |
KW | nnet | GSP, MAT, Pseudotsuga menziesii, P. strobiformis, P. arizonica, SMRPB | 17.856 | 17.128 | 0.621 |
PLS = Partial Least Squares, ROC = Receiver Operating Characteristic, KW = Kruskal Wallis, rf = Random Forest, brnn = Bayesian Regularized Neural Networks, lm = linear regression, mlpWeightDecay = Multi-Layer Perceptron, nnet = Neural Network, avNNet = Model Averaged Neural Network, RMSE = Root-mean-square error, MAE = Mean Absolute Error, R2 = R squared, GSP = Growing season precipitation, April to September, Pseudotsuga menziesii = frequency of occurrence of Pseudotsuga menziesii in the neighborhood, SMRPB = Summer precipitation balance: (jul+aug+sep)/(apr+may+jun), Juniperus deppeana = frequency of occurrence of Juniperus deppeana in the neighborhood, P. arizonica = frequency of occurrence of P. arizonica in the neighborhood, P. strobiformis = frequency of occurrence of P. strobiformis in the neighborhood, P. cooperi = frequency of occurrence of P. cooperi in the neighborhood, Arbutus xalapensis = frequency of occurrence of Arbutus xalapensis, Arctostaphylos pungens = frequency of occurrence of Arctostaphylos pungens MAT = Mean annual temperature (degrees C), WINP = Winter precipitation: (nov+dec+jan+feb).