Type of linear RNA compared to circRNA |
5’ hydroxyl linear RNA |
5’ triphosphate linear RNA |
RNase R treatment of in vitro transcribed circRNA |
2–3 hours |
15 min |
Phosphatase treatment |
2 hours |
15 min |
Experiment readout |
Measure immune gene expression |
Measure cytokine and chemokine in culture medium |
RNA transfection |
Forward, used Lipofectamine 2000 |
Reverse, used Lipofectamine MessengerMax |
RNA transfection efficiency |
Measured levels of RNA delivered for normalization |
Did not measure levels of RNA delivered |