Table 3. BUSCO completeness of giant sequoia 2.0 assembly and annotation.
| Giant sequoia v2.0 | Giant sequoia v2.0 (≥3kbp) | Transcriptome | Transcriptome mapped to genome | High-confidence gene set | |
|---|---|---|---|---|---|
| Number of input sequences | 8215 | 8120 | 25859 | 22697 | 41633 |
| Complete BUSCOs (C) | 612 | 613 | 1377 | 1184 | 806 |
| Complete and single-copy BUSCOs (S) | 576 | 577 | 1333 | 1140 | 751 |
| Complete and duplicated BUSCOs (D) | 36 | 36 | 44 | 44 | 55 |
| Fragmented BUSCOs (F) | 192 | 191 | 95 | 84 | 260 |
| Missing BUSCOs (M) | 810 | 810 | 142 | 346 | 548 |
| Total BUSCO groups searched | 1614 | 1614 | 1614 | 1614 | 1614 |
| Percentage found | 37.92% | 37.98% | 85.32% | 73.36% | 49.94% |
Completeness of giant sequoia 2.0 assembly and gene sets assessed with BUSCOv4.0.2. Giant sequoia v2.0 is the entire assembly and giant sequoia v2.0 (≥3kbp) only includes scaffolds at least 3kbp in length.