Table 1. The S. glanis genome size, heterozygosity and repeat content as estimated by the GenomeScope and findGSE software.
| Genome characteristics | k-mer size | ||
|---|---|---|---|
| k = 17 | k = 21 | k = 25 | |
| GenomeScope | |||
| Genome haploid length (Mb) | 723.4 | 753.6 | 769.9 |
| Genome repeat length (Mb) | 337.8 | 216.8 | 205.4 |
| Genome unique length (Mb) | 385.6 | 536.7 | 564.5 |
| Heterozygosity, % | 0.24 | 0.25 | 0.23 |
| Estimated repetitive ratio,% | 46.7 | 28.8 | 26.7 |
| Read error rate, % | 0.30 | 0.36 | 0.36 |
| findGSE | |||
| Genome haploid length (Mb) | 822.6 | 901.3 | 906.5 |
| Genome repeat length (Mb) | 395.1 | 326.9 | 300.2 |
| Genome unique length (Mb) | 427.5 | 574.5 | 606.3 |
| Estimated repetitive ratio, % | 48.0 | 36.3 | 33.1 |