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. 2020 Oct 22;10:583625. doi: 10.3389/fonc.2020.583625

TABLE 3.

Candidate PCa-associated SNPs retained after LD clumping for construction of PRS (n = 6).

SNP CHR BP Gene P SNPs in LD Risk allele Minor allele = risk allele Weight [log(OR)]
rs1016343 8 128103937 PRNCR1 1.46 × 10–15 rs13252298, rs16901979 A Y 0.469
rs4242384 8 128518554 CASC8;LOC105375754 1.97 × 10–10 rs1447295, rs4242382, rs7837688 C Y 0.444
rs7501939 17 36101156 HNF1B 6.42 × 10–7 rs4430796 C N 0.333
rs1512268 8 23526463 NKX3.1;LOC107986930 6.51 × 10–6 A Y 0.265
rs2735839 19 51364623 KLK2;KLK3 6.84 × 10–6 G N 0.266
rs2016588 6 159425707 LOC105378083 1.69 × 10–5 A Y 0.237