Table 1.
List of candidate genes and relative variants analysed, DNA sequence variations and functional consequences. Forward (FW) and reverse (RV) primers used in the PCR reactions, restriction enzymes and references are reported for each variants.
Gene, SNP/VNTR | DNA variation | Functional Consequence | Primer, FW and RV (5’-3’) | Restriction enzyme | Reference |
---|---|---|---|---|---|
CNR1, rs1049353 | A/G (REV) | synonymous codon: Thr ⇒ Thr | FW- GAAAGCTGCATCAAGAGCCC RV- TTTTCCTGTGCTGCCAGGG |
MspI | Gadzicki et al., 1999 |
FAAH, rs324420 | A/C (FWD) | missense: Pro ⇒ Thr | FW-ATGTTGCTGGTTACCCCTCTCC RV- TCACAGGGACGCCATAGAGCTG |
EcoO109I | Morita et al., 2005 |
COMT, rs4680 | A/G (FWD) | missense, upstream variant 2KB: Val ⇒ Met | FW-TCGTGGACGCCGTGATTCAGG RV- AGGTCTGACAACGGGTCAGGC |
NlaIII | Hong et al., 2003 |
DRD2, rs6277 | C/T (REV)* | synonymous codon: Pro ⇒ Pro | FW-a) ACCACGGTCTCCACAGCACTCT b) ACCATGGTCTCCACAGCACTCT’ RV- ATGGCGAGCATCTGAGTGGCT |
TaqaI / BslI | Hirvonen et al., 2009 |
ANKK1, rs1800497 | C/T (REV) | missense: Glu⇒ Lys | FW-CCGTCGACGGCTGGCCAAGTTGTCTA RV- CCGTCGACCCTTCCTGAGTGTCATCA |
TaqaI | Grandy et al., 1993 |
DAT1, VNTR 3’UTR | 40bp, 3-11 repeats | 3’UTR | FW-TGTGGTGTAGGGAACGGCCG AG RV- CTTCCTGGAGGTCACGGCTCAAGG |
/ | Santtila et al., 2010 |
DRD4, VNTR exon 3 | 48bp, 2-11 repeats | exon 3 | FW-AGGTGGCACGTCGCGCCAAGCTGCA RV- TCTGCGGTGGAGTCTGGGGTGGGAG |
/ | Mitsuyasu et al., 2001 |
rs6277 C957T SNP, has been studied in association with the mutation G1101A