Table 1.
Epidemiological Information for the Isolates in This Study
| Location and Strain | Campylobacter Species | Date ofCollection | Age, y | Sex | MSM | HIV | Travel/Origin | Resistance |
|---|---|---|---|---|---|---|---|---|
| Québec | ||||||||
| 42478 | C. coli | Dec 2017 | 24 | M | Y | N | … | FQ, AZM, TET, GEN |
| 43371 | C. coli | Dec 2017 | 44 | M | Y | Y | … | FQ, AZM, TET, GEN |
| 48777 | C. coli | Jan 2018 | 40 | M | Y | Y | … | FQ, AZM, TET |
| 76331 | C. coli | May 2018 | 48 | M | Y | N | … | FQ, AZM, TET |
| 138449 | C. coli | Jan 2015 | 62 | M | Y | Y | … | FQ, AZM, TET |
| 143854 | C. coli | Sep 2015 | 29 | M | Y | N | … | FQ, AZM, TET |
| 143970 | C. coli | Sep 2015 | 59 | M | Y | Y | … | FQ, AZM, TET |
| 148558 | C. coli | Apr 2016 | 74 | M | N | NA | … | FQ, AZM, TET |
| 158403 | C. coli | Apr 2017 | 25 | M | NA | NA | … | FQ, AZM, TET |
| Washington State | ||||||||
| SP15-082 | C. coli | Jul 2015 | 68 | M | N | N | Malaysia | FQ, AZM, TET |
| SP16-070 | C. coli | Jun 2016 | 21 | M | N | N | Thailand | FQ, AZM, TET |
| SP17-196 | C. jejuni | Dec 2017 | 72 | M | N | N | Philippines | FQ, AZM, TET |
| HMC314 | C. jejuni | Jan 2018 | 55 | M | Y | N | … | FQ, AZM |
| SP18-054 | C. coli | Feb 2018 | 25 | M | Y | N | … | FQ, AZM, TET, GEN |
| SP18-090 | C. coli | Feb 2018 | 27 | M | Y | Y | … | FQ, AZM, TET, GEN |
| S871 | C. coli | Mar 2018 | 34 | M | Y | Y | … | FQ, AZM, TET |
| SP18-164 | C. jejuni | Jun 2018 | 22 | M | Y | N | … | FQ, AZM |
| SP18-232 | C. coli | Oct 2018 | 59 | F | N | N | … | FQ, AZM, TET |
| Pathogen Detection (NCBI) | ||||||||
| PNUSAC002907 | C. coli | Sep 2017 | 30-39 | … | … | … | Midwest US | … |
| PNUSAC000107 | C. coli | May 2015 | 20-29 | … | … | … | Midwest US | … |
| PNUSAC000108 | C. coli | Jul 2015 | 30-39 | … | … | … | Midwest US | … |
| PNUSAC000199 | C. coli | Nov 2015 | 50-59 | … | … | … | Midwest US | … |
| PNUSAC000219 | C. coli | Nov 2015 | 50-59 | … | … | … | Midwest US | … |
| PNUSAC006454 | C. coli | … | … | … | … | … | … | … |
| PNUSAC007077 | C. coli | … | … | … | … | … | … | … |
| PNUSAC008980 | C. coli | … | … | … | … | … | … | … |
| PNUSAC007971 | C. jejuni | … | … | … | … | … | … | … |
| NC05-27 | C. jejuni | 2005 | … | … | … | … | … | … |
| PNUSAC000631 | C. jejuni | Jun 2016 | 20-29 | … | … | … | Southwest US | … |
| PNUSAC001707 | C. jejuni | … | … | … | … | … | … | … |
| PNUSAC004578 | C. jejuni | May 2018 | 30-39 | … | … | … | Midwest US | … |
| PNUSAC005510 | C. jejuni | Jul 2018 | 20-29 | … | … | … | Midwest US | … |
| PNUSAC005955 | C. jejuni | Aug 2018 | 20-29 | … | … | … | Midwest US | … |
| PNUSAC006340 | C. jejuni | … | … | … | … | … | … | … |
| PNUSAC006599 | C. jejuni | Mar 2018 | 20-29 | … | … | … | Southeast US | … |
| PNUSAC006863 | C. jejuni | Jun 2018 | 30-39 | … | … | … | Southeast US | … |
| PNUSAC007906 | C. jejuni | … | … | … | … | … | … | … |
Colored rows differentiate genomic clusters.
Abbreviations: AZM, azithromycin; F, female; FQ, fluoroquinolone; GEN, gentamicin; HIV, human immunodeficiency virus; M, male; MSM, men who have sex with men; N, no; NA, not available; NCBI, National Center for Biotechnology Information; TET, tetracycline; US, United States; Y, yes.