Table 1.
General traits and genomic features of A. baumannii strains under study
|
Strains |
|||
|---|---|---|---|
|
Ab242 |
Ab244 |
Ab825 |
|
|
General traits*1 |
|||
|
Former designation/alias |
24 214 |
24 474 |
825 |
|
Isolation date |
1997-10-01 |
1997-10-01 |
1999-03-01 |
|
Specimen/source |
ascitic fluid |
blood |
wound |
|
Carbapenem susceptibility Phenotype |
Resistant |
Susceptible |
Resistant |
|
Genomic parameters*2 |
|||
|
Depth of coverage |
47.6x |
25.9x |
103.0x |
|
Number of contigs |
107 |
99 |
99 |
|
Estimated size (Mbp) |
4 |
3.9 |
3.9 |
|
GC content (%) |
39.2 |
39.1 |
39.1 |
|
Number of CDSs |
3722 |
3659 |
3614 |
|
Number of tRNA genes |
61 |
64 |
63 |
|
Number of rRNA operons |
3 |
3 |
3 |
|
Prophage regions |
4 |
3 |
4 |
|
ISs |
12 |
10 |
45 |
|
Complete plasmids |
3 (accession numbers KY984045.1, KY984046.1 And KY984047.1) |
1 (accession number MG520098) |
2 (accession numbers MG100202.1 And MG100203.1 |
|
BioProject |
PRJNA398382 |
PRJNA398382 |
PRJNA398382 |
|
Biosample |
SAMN07509424 |
SAMN08028494 |
SAMN07573381 |
|
Accession |
|||
*1 See reference 27.
*2 Based on NCBI Prokaryotic annotation pipeline.