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. Author manuscript; available in PMC: 2020 Nov 5.
Published in final edited form as: Methods Enzymol. 2019 Jun 18;623:417–450. doi: 10.1016/bs.mie.2019.05.028

Table 1.

Example theoretical maximum AR (ARmax) and estimated optimality from values reported in literature, including necessary information needed to perform calculation.

Source Ligand Switch direction KdI (μM) ARexp Source of ARexp estimate [I] at ARmax(μM) ARmax:1+[I]/KdI Optimality: ARexp/ARmax
Tang and Breaker (1997b) ATP OFF 10a 180 Ribozyme cleavage products on gel 1000 101 1.78
Soukup and Breaker (1999a) FMN ON 0.5b 33 Ribozyme cleavage products on gel 20 40 0.83
Suess et al. (2004) Theophylline OFF 0.3c 8 Beta-galactosidase activity in B. subtilis 6000 17,650 0.0005
Wieland, Benz, Klauser, and Hartig (2009) TPP ON 0.32d 7.5 GFP fluorescence in E. coli 100 313 0.02
Kellenberger et al. (2013) c-AMP-GMP ON 4.2e 6.4 Spinach-DFHBI fluorescence in E. coli 100 25 0.26