Table 3.
Model characteristics generated by MODELLER v.9.24.
| Sr.No. | Features | Model 1 | Model 2 |
|---|---|---|---|
| 1 | Target region | 14–302 | 330–529 |
| 2 | Protein length | 1273 | 1273 |
| 3 | PDB template code | 5 × 4S A | 6YLA E |
| 4 | Template region | 18–289 | 330–529 |
| 5 | Sequence identity | 54% | 100% |
| 6 | E-value | 0 | 0 |
| 7 | GA341 | 1 | 1 |
| 8 | MPQS | 0.786723 | 1.37941 |
| 9 | z-DOPE | −0.3 | −1.32 |
| 10 | TSVMod method | MSALL | MSALL |
| 11 | TSVMod RMSD | 3.711 | 0.464 |
| 12 | TSVMod NO35 | 0.923 | 0.972 |
E-value: no: of expected hits of similar quality; MPQS: ModPipe Quality Score; z-DOPE: Discrete Optimized Protein Energy Score of Salilab Model evaluation server; TSVMod RMSD: Root Mean Square Deviations; TSVModNO35: Native Overlap prediction of fraction of Cα atoms within 3.5 Å of the native structure.