TABLE 1.
SASP components identifiedin the regressing interdigits.
| Genes | 6 id | 7.5 id | 8 id |
|
Expression fold changes |
|||
| Senescence-associated secretory phenotype (SASP; Lorda-Diez et al., 2015) | |||
| IL8L1 | 1.00 ± 0.04 | 11.10 ± 3.51* | 20.59 ± 5.18* |
| IL8L2 | 1.02 ± 0.08 | 1.93 ± 0.22** | 3.12 ± 0.46* |
| AREGB | 1.05 ± 0.19 | 2.23 ± 0.43* | 2.46 ± 0.71* |
| HGF | 1.01 ± 0.08 | 1.98 ± 0.20** | 1.85 ± 0.37* |
| TGFβ2 | 1.03 ± 0.07 | 1.85 ± 0.25* | 2.53 ± 0.53* |
| IGF1 | 1.00 ± 0.01 | 5.72 ± 1.62* | 7.86 ± 2.20* |
| IGFBP5 | 1.00 ± 0.02 | 7.70 ± 1.86** | 19.36 ± 4.44** |
| MMP2 | 1.01 ± 0.06 | 2.79 ± 0.45** | 4.47 ± 0.78* |
| MMP9 | 1.00 ± 0.02 | 2.49 ± 0.44** | 4.33 ± 0.91* |
| Adamts9 | 1.00 ± 0.04 | 6.70 ± 1.11** | 22.66 ± 5.92* |
| FAS | 1.02 ± 0.04 | 1.88 ± 0.18*** | 1.81 ± 0.24* |
| TNFRSF21 | 1.00 ± 0.02 | 0.83 ± 0.12 | 1.62 ± 0.25* |
| TNFRSF23 | 1.03 ± 0.14 | 1.92 ± 0.31* | 3.28 ± 0.88* |
| Other SASP components upregulated in the interdigit | |||
| TNFα | Wride et al., 1994 | ||
| MMP11 | Dupé et al., 1999 | ||
| tTG | Dupé et al., 1999 | ||
| FASLG | Svandova et al., 2017 | ||
The upper part of the table shows components undergoing intense transcriptional upregulation in the third interdigits of the chick limb. Note the increased expression from the stage preceding interdigit remodeling (id 6) to the stage of peak degeneration (id 8). The lower part of the table corresponds to characteristic SASP components reported to be expressed at high levels in the regressing interdigits of mouse and human embryos. ***p < 0.001; **p < 0.01; *p < 0.05 statistical significance (bold) in differences of gene expression levels between 7.5id (middle column) and 8id (right column) vs 6 id (left column).