Table 1.
List of candidate genes identified by GWAS analysis of Smurf data collected from DGRP fly lines.
| Cka marker | Gene | Human orthologue | Effect/location | Interaction P value |
FDR (%) |
|---|---|---|---|---|---|
| 2L_6284412_SNP | Ddr | DDR2 | INTRON | 0.00030849 | 0 |
| 2L_6283921_SNP | Ddr | DDR2 | INTRON | 0.00070189 | 8 |
| 3L_3480865_SNP | CG42324 | TJAP1 | INTRON | 0.00109696 | 10 |
| 3R_21373234_SNP | msi | MSI1/2 | INTRON | 0.00140678 | 14 |
| X_12489073_SNP | CG1824 | ABCB8 | NON _CODING | 0.00206947 | 24 |
| 2L_8035397_SNP | Cka | STRN3 | INTRON | 0.00217694 | 25 |
The table is showing the location of the SNP associated with increased intestinal permeability, and location of the SNP. The candidates with False discovery rate ≤ 25% for analysis.