Table 2.
A list of simple sequence repeats in the chloroplast genome of A. catechu. The SSR-containing coding regions are indicated in parentheses.
| Repeat unit | Length (No. of units) | Number | Start position |
|---|---|---|---|
| ATGTA | 4 | 1 | 27855 |
| TATTT | 3 | 1 | 43151 |
| TTTCA | 3 | 1 | 67458 |
| TTTAT | 3 | 1 | 71217 |
| ATAAT | 3 | 1 | 84531 (rpl16-intron I) |
| TCTA | 4 | 1 | 6054 |
| AATG | 3 | 1 | 63995 (cemA) |
| ATAA | 3 | 1 | 73633 (clpP) |
| AATA | 3 | 3 | 7197, 84785 (rpl16-intron I), 118973 (ndhD) |
| TTTA | 3 | 1 | 121721 |
| CAG | 4 | 1 | 716 (psbA) |
| AAT | 4 | 1 | 3924 |
| TAT | 6 | 1 | 47868 |
| ATA | 4 | 1 | 129311(ycf1) |
| AT | 8 | 1 | 8862 |
| AT | 5 | 1 | 20751 (rpoC2) |
| TA | 5 | 1 | 30383 |
| AT | 7 | 1 | 49130 |
| AT | 9 | 1 | 50075 |
| AT | 6 | 1 | 70535 |
| TC | 5 | 1 | 126168 |
| A | 10 | 7 | 3595, 3796, 7370, 8039, 9468, 10097, 12389 |
| A | 11 | 6 | 13007 (atpF-intron I), 13265 (atpF-intron I), 13942, 15278, 17177, 23506 (rpoC1) |
| A | 12 | 2 | 23827 (rpoC1-intron I), 29614 |
| A | 13 | 1 | 30258 |
| A | 14 | 1 | 33820 |
| A | 15 | 1 | 38310 (rps14) |
| T | 10 | 6 | 44492 (ycf3-intron I), 54542, 56663, 61122, 61338, 67870 |
| T | 11 | 10 | 67983, 68681, 69413, 69702, 71097, 73166 (clpP-intron I), 73434 (clpP-intron I), 73971 (clpP-intron II), 77773 (petB-intron I), 82487 |
| T | 12 | 3 | 83362, 85455 (rpl16-intron I), 86844, 87232 |
| T | 13 | 6 | 116155, 118714, 126666, 129962 (ycf1), 130141 (ycf1), 130511 (ycf1) |
| T | 14 | 1 | 130645 (ycf1) |