TABLE 3.
List of QTLs contributing to FW resistance in various grain legumes.
| Crop | Mapping population size and type | QTL/gene | Type of marker and name | LG group | PV% | QTL method analysis | References |
| Chickpea | – | H1 locus of Foc 1 | CS27A(RAPD) | – | – | – | Mayer et al., 1997 |
| Chickpea | C-104 × WR-315 (100 F5) | Single recessive gene (race 1 and race4) | CS-27700, UBC-170550 (RAPD) | – | – | – | Tullu et al., 1998 |
| Chickpea | C. arietinum × C. reticulatum (130, RIL) | races 4 and 5 | STMS and a SCAR | – | – | – | Winter et al., 2000 |
| Chickpea | 131 (F6 RIL) | foc-0, foc-4, and foc-5 | CS-27 (STS) | – | – | – | Tekeoglu et al., 2000 |
| Chickpea | CA2156 × JG62 (RIL) | Foc 01/foc 01 | OPJ20(600) (RAPD) | – | – | Maximum Likelihood method | Rubio et al., 2003 |
| CA2139 × JG62 (RIL) | Foc 01/foc 01 and Foc 02/foc 02 | – | – | ||||
| Chickpea | CA2139 × JG62 (RIL) | One gene resistance for Fusarium wilt race 0 (Foc0) | OPJ20(600) (RAPD) TR59(STMS) | LG3 | – | – | Cobos et al., 2005 |
| Chickpea | WR315 × C104 | Three loci (race 2) | – | – | Kumar, 2006 | ||
| WR315 × K850 | |||||||
| K850 × GW5/7 | |||||||
| Chickpea | WR-315 × C-104 | foc-3 gene | TA96 and TA27, TA196 (STMS) | – | MAPMAKER program | Sharma et al., 2004; | |
| 100 F7 | foc-1 [syn. h(1)] and foc-4 | CS27A (STS) | Winter et al., 2000; | ||||
| TA194 (STMS) | Gowda et al., 2009 | ||||||
| Chickpea | CA2156 × JG62 | Single gene (race 0) | OPJ20600 (RAPD) | – | Rubio et al., 2003 | ||
| CA2139 × JG62 | |||||||
| Chickpea | – | Foc5 | TA59 and TA96 (SSR) | – | – | – | Cobos et al., 2009 |
| Chickpea | F9 | Foc1 | H3A12 and TA110 (STMS) | – | Gowda et al., 2009 | ||
| Chickpea | Foc2 | TA96 and H3A12 (STMS) | |||||
| Chickpea | Foc3 | H1B06y and TA194 | |||||
| Chickpea | CA2139 × JG62 (RIL) | Foc02/foc02 | TA59 (STMS) | LG2 | 22–26 | Interval mapping, multiple-QTL models (MQM) | Halila et al., 2009 |
| CA2156 × JG62 (RIL) | |||||||
| Chickpea | – | foc-5 | TA59 (STMS) | LG2 | Castro et al., 2010 | ||
| Chickpea | C214 × WR315 | FW-Q-APR-6-1 (Foc1) and FW-Q-APR-6-2 (Foc1) | CaM1402 and CaM1101 (STMS) | LG6 | 10.4–18.8 | Sabbavarapu et al., 2013 | |
| QTLNetwork 2.0 | |||||||
| Composite interval mapping | |||||||
| Chickpea | JG62 × WR315, (94 RIL) | Wilt 1 (race 1), Wilt 2 (race 1) | TA27-TA59 (STMS) | LG2 | 16–36 | Patil et al., 2014 | |
| TA27-TA110 (STMS) | |||||||
| Chickpea | C 214 × WR 315 | Genomic region resistance for foc1 and foc3 | TR19, TA194, TAA60, GA16, TA110, and TS82 | LG2 | – | – | Varshney et al., 2014 |
| Chickpea | K850 × WR315 (RIL, 140) | 5 QTLs | GSSR 11-EST SSR 3 | LG1 | 56–70 | Jingade and Ravikumar, 2015 | |
| TR 24-EST SSR 21 | |||||||
| EST SSR 21-EST SSR 65 | |||||||
| GSSR 18-TC14801 | |||||||
| Chickpea | CA2156 × JG62 (RIL, 80) | Foc01/foc01 | H2I20 and TS43 (STMS) | LG5 | – | Interval mapping | Jendoubi et al., 2016 |
| ILC3279 × JG62 (RIL, 115) | LOC101514038 and LOC101499491 | CaGM20820, CaGM20889 | |||||
| JG62 × ILC72 (RIL, 102) | Candidate genes | ||||||
| Chickpea | Pusa 256 × Vijay | Foc 2 | TA 37 and TA110 | – | – | Pratap et al., 2017 | |
| Chickpea | JG62 × ICCV 05530 | 3 QTL (race 1), FW-Q-APR-2-1 | TR19 and H2B061 | CaLG02 | 6.6–31.5 | QTL-IciMapping | Garg et al., 2018 |
| FW-Q-APR-4-1, FW-Q-APR-6-1 | TA132 and TA46 | CaLG04 and CaLG06 | |||||
| 2 QTLs (race 3) | TA80 and CaM0594 | CaLG02 and CaLG04 | |||||
| FW-Q-APR-2-1 and FW-Q-APR-4-1 | CKAM1256 and TS72 | ||||||
| Chickpea | WR315 × ILC3279 (RIL, 103) | LOC101511605 (Foc5) | TA59, CaGM07922, SNPs | LG2 | – | – | Caballo et al., 2019b |
| ICCL81001 × Cr5-9 (RIL 88) | |||||||
| Chickpea | Annigeri 1 × WR 315 (BC) | Genomic region conferring resistance against | TA59, TA96, TR19, and TA27 | LG2 | – | Mannur et al., 2019 | |
| JG 74 × WR315 (BC) | foc4 | GA16 and TA96 | |||||
| Common bean | F2 and F3 | One dominant gene for Fop race 4 | – | – | – | – | Cross et al., 2000 |
| Common bean | Belneb RR-1 A55 | One major QTL | RAPD, U20.750 | LG10 | 63.5 | – | Fall et al., 2001 |
| RILs (76) | |||||||
| Cowpea | CB5 × CB3, CB5 × 7964, F1, F2, and BC | One dominant gene (race 2), one dominant gene (race 3) | – | – | – | – | Rigert and Foster, 1987 |
| Cowpea | California Blackeye 27 × 24-125B-1 | Fot3-1 | SNP 1_0860 and 1_1107 1_1484 and 1_0911 | LG6 | 27.8 | Kruskal–Wallis and interval mapping analysis | Pottorff et al., 2012 |
| Cowpea | IT93K-503-1 × CB46 | Fot4-1 and Fot4-2. Fot4-1 | - | LG3 | – | Interval mapping | Pottorff et al., 2014 |
| CB27 × 24-125B-1 | |||||||
| CB27 × IT82E-18/Big Buff | |||||||
| Cowpea | A panel of 96 genotypes | 17 significant MTAs for Fusarium wilt resistance | SNP 1_0075, 1_1111,1_1147, 1_0251, 1_0895, 1_0691, 1_0897, 1_0298, 1_0410, 1_0857, 1_0981, 1_1369, 1_0691, 1_0330, 1_1062, 1_0629, 1_0318, and 1_1504 | LG1, LG3, LG4, LG5, LG6, LG8,LG9, LG10, and LG11 | 2–4 | –– | Wu et al., 2015 |
| Cowpea | F1, F2, and BC | – | SSR, C13−16 | –– | Omoigui et al., 2018 | ||
| Pea | Green arrow × PI179449 | Fw | ACG:CAT_222(AFLP) | –– | –– | McClendon et al., 2002 | |
| ACC:CTG(AFLP), Y15_1050(RAPD) | –– | –– | |||||
| Pea | – | Fw | – | LG3 | – | Grajal-Martin and Muehlbauer, 2002 | |
| Pea | Shawnee × Bohatyr | Fnw | LG4 | – | McPhee et al., 2012 | ||
| RILs (187) | |||||||
| Pea | Lifter × Radley (393 RIL) and Shawnee × Bohatyr (187 RIL) | Fw | THO(CAPS marker) | LG3 | 70––92 | Single–factor ANOVA | Jain et al., 2015 |
| PRX1TRAP13(TRAP marker) | |||||||
| AnMtL6, Mt5_56 | |||||||
| Lentil | ILL 5588 × L 692-16-1(s), (RIL 86) | Fw gene | SSR59-2B, p17m30710 | LG6 | – | – | Hamwieh et al., 2005 |
| Lentil | ILL5588 × L692–16−l(s) | Fw gene | OP−BH800 and OP−DI5500 | – | – | – | Eujayl et al., 2006 |
| F2:4, RIL | |||||||
| Pigeonpea | GSlxICPL87119,(254 F2) | One gene | RAPD (OPM03704 and OPAC11500) | – | – | – | Kotresh et al., 2006 |
| GS1 × ICP8863 | |||||||
| Pigeonpea | ICPL 20096 × ICPL 332 | C.cajan_03203 | SNP | LG2, LG11 | – | Seq–BSA approach | Singh V. K. et al., 2016 |
| (RIL F7) | C.cajan_07078 | ||||||
| C.cajan_07124 | |||||||
| C.cajan_02962 | |||||||
| Pigeonpea | ICPB 2049 × ICPL 99050 (RIL) | qFW1.1,qFW2.1 | SNP, S1_2827280–S1_4263752 | LG1, LG2, LG3, LG4, and LG6 | 6.5–14 | Composite interval mapping | Saxena et al., 2017 |
| ICPL 20096 × ICPL (332 RIL) | qFW3.1,qFW4.1 | S2_16115010–S2_15580586 | |||||
| ICPL 85063 × ICPL 87119 (F2) | qFW6.1,qFW11.1 | S3_18695411–S3_17153283 | |||||
| qFW11.2,qFW11.3 | S4_597553–S4_1108184 | ||||||
| S4_597553–S4_1108184 | |||||||
| S6_22726005–S6_23553522 | |||||||
| S11_37262913–S11_37133265 | |||||||
| S11_43777543–S11_37133265 | |||||||
| S11_20607023–S11_16809228 | |||||||
| S11_4243778–S11_22408748 |