Table 3.

Description of the used genomic SSR loci including chromosome location (Ch), major allele frequency (MAF), number of alleles (Na), effective number of alleles (Ne), Shannon’s information index (I), gene diversity (He) and polymorphic information (PIC).

Marker	Ch	MAF	Na	Ne	I	He	PIC	Marker	Ch	MAF	Na	Ne	I	He	PIC
Bmac32	1H	0.15	15	10.06	2.43	0.90	0.89	HVM36	2H	0.62	3	2.00	0.80	0.50	0.41
Bmac63	1H	0.16	9	7.85	2.11	0.87	0.86	Bmac209	3H	0.36	7	3.80	1.53	0.74	0.70
Bmac213	1H	0.20	10	7.96	2.18	0.87	0.86	Bmag013	3H	0.35	6	3.57	1.41	0.72	0.67
Bmag149	1H	0.53	5	2.56	1.08	0.61	0.54	EBmac225	3H	0.18	11	8.24	2.23	0.88	0.87
Bmag211	1H	0.38	5	3.43	1.34	0.71	0.65	EBmac541	3H	0.51	6	2.97	1.31	0.66	0.62
Bmag45	1H	0.49	5	2.51	1.04	0.60	0.52	EBmac871	3H	0.23	8	6.23	1.94	0.84	0.82
Bmag82	1H	0.47	7	3.45	1.51	0.71	0.68	GBMS183	3H	0.48	5	3.22	1.37	0.69	0.65
Bmag504	1H	0.57	3	2.01	0.75	0.50	0.39	GMS116	3H	0.18	10	8.05	2.17	0.88	0.86
EBmac560	1H	0.74	2	1.64	0.58	0.39	0.31	HV13	3H	0.67	3	1.93	0.82	0.48	0.42
EBmac659	1H	0.94	2	1.12	0.21	0.10	0.10	HV13GEIII	3H	0.65	3	2.02	0.85	0.50	0.44
HVM20	1H	0.79	2	1.49	0.51	0.33	0.27	HVES1A	3H	0.73	2	1.65	0.59	0.40	0.32
HVM43	1H	0.94	4	1.12	0.27	0.11	0.11	Bmac310	4H	0.39	8	4.39	1.71	0.77	0.75
Bmac132	2H	0.80	2	1.47	0.50	0.32	0.27	Bmag375	4H	0.50	3	2.68	1.04	0.63	0.56
Bmac134	2H	0.59	8	2.62	1.38	0.62	0.59	Bmag419	4H	0.29	8	5.47	1.86	0.82	0.79
Bmag114	2H	0.82	2	1.43	0.48	0.30	0.26	Bmag740	4H	0.34	14	5.03	2.01	0.80	0.78
Bmag140	2H	0.52	3	2.52	1.08	0.60	0.53	Bmag138	4H	0.57	8	2.82	1.47	0.65	0.62
Bmag378	2H	0.52	3	2.59	1.02	0.61	0.54	EBmac635	4H	0.29	10	6.37	2.06	0.84	0.83
Bmag518	2H	0.48	5	3.04	1.30	0.67	0.62	EBmac788	4H	0.14	12	10.65	2.42	0.91	0.90
Bmag720	2H	0.18	11	7.37	2.13	0.86	0.85	EBmac906	4H	0.29	8	4.75	1.70	0.79	0.76
Bmag813	2H	0.31	9	5.38	1.87	0.81	0.79	EBmac679	4H	0.23	10	6.88	2.06	0.85	0.84
EBmac525	2H	0.71	3	1.76	0.71	0.43	0.36	GMS89	4H	0.35	5	3.55	1.37	0.72	0.67
EBmac558	2H	0.92	2	1.16	0.27	0.14	0.13	HVBAMY	4H	0.57	3	2.36	0.97	0.58	0.51
EBmac854	2H	0.74	4	1.71	0.80	0.41	0.38	HVM68	4H	0.47	5	2.79	1.17	0.64	0.58
EBmatc39	2H	0.71	2	1.70	0.60	0.41	0.33	HVM40	4H	0.31	5	3.99	1.46	0.75	0.71
GBMS0160	2H	0.39	9	4.67	1.85	0.79	0.77	HVM51	4H	0.61	2	1.91	0.67	0.48	0.36
Bmac96	5H	0.54	4	2.70	1.17	0.63	0.58	Bmac167	7H	0.55	3	2.28	0.92	0.56	0.48
Bmac113	5H	0.28	6	4.80	1.66	0.79	0.76	Bmag507	7H	0.15	14	9.74	2.41	0.90	0.89
Bmac163	5H	0.84	4	1.38	0.57	0.28	0.26	Bmag516	7H	0.29	8	5.85	1.90	0.83	0.81
Bmag751	5H	0.38	5	3.65	1.42	0.73	0.68	EBmag794	7H	0.80	3	1.51	0.63	0.34	0.31
Bmag812	5H	0.69	5	1.96	0.99	0.49	0.46	EBmatc16	7H	0.21	11	6.53	2.01	0.85	0.83
Bmac40	6H	0.24	12	7.93	2.67	0.87	0.86	GBMS141	7H	0.23	10	6.84	2.08	0.85	0.84
Bmag9	6H	0.30	5	3.90	1.44	0.74	0.70	GMS46	7H	0.70	3	1.87	0.82	0.46	0.42
Bmag807	6H	0.63	5	2.22	1.07	0.55	0.50	HVM49	7H	0.38	7	3.33	1.44	0.70	0.65
EBmac624	6H	0.48	3	2.69	1.04	0.63	0.55	HVLMNO1A	-	0.87	4	1.31	0.51	0.24	0.22
GBMS180	6H	0.35	6	4.47	1.63	0.78	0.74	MGB384	–	0.62	2	1.90	0.67	0.47	0.36
HVM31	6H	0.54	2	1.99	0.69	0.50	0.37	Mean		0.48	5.96	3.83	1.32	0.63	0.58
HVM74	6H	0.22	10	7.07	2.10	0.86	0.84	SE	–	0.02	0.34	0.23	0.06	0.02	0.02