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. 2020 Sep 23;32(6):961–963. doi: 10.1177/1040638720954888

Table 1.

Mean TaqMan7 real-time PCR Ct values for African swine fever virus obtained from alternative testing sample matrices.

Matrix TaqMan mean Ct value
Mean Ct value
Genotype I
Genotype II
Pig 1, 5 dpi Pig 2, 5 dpi Pig 3, 4 dpi Pig 4, 5 dpi Pig 5, 5 dpi Pig 6, 5 dpi
Swab
 Oral 27.9 32.4 23.4 36.3 29.1 25.6 29.1
 Nasal 27.9 29.4 23.9 33.1 32.5 30.3 29.5
 Rectal 31.3 32.7 29.6 35.8 35.2 39.5 34.0
Bone marrow
 Humerus 18.2 23.8 19.3 21.9 20.2 19.0 20.4
 Rib 17.1 19.1 21.7 20.0 19.1 21.5 19.7
Ear biopsy
 1 29.4 31.8 28.6 31.2 26.4 25.9 28.9
 2 28.7 29.7 28.6 27.5 24.8 27.1 27.7
 3 28.8 30.7 27.0 28.6 27.5 29.3 28.6
 4 29.5 29.6 29.3 30.7 27.9 27.8 29.1
 5 27.0 28.7 28.8 30.3 28.2 29.2 28.7
 6 29.7 29.5 27.9 29.2 28.2 30.6 29.2

Ct = cycle threshold.