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. 2020 Nov 3;8:e10143. doi: 10.7717/peerj.10143

Table 4. Prediction of the percentages of secondary structure components in NTDs of selected bacterial Tcps using SOPMA and GOR IV servers.

N-TcpC N-TIpA N-BtpA N-BtpB N-PdTLP N-YpTdp N-TirS N-SaTIp1 N-HP1437 N-TcpYI N-TcpYIII
Alpha helix 41.18 88.05 100 38.46 76.97 41.91 85.92 58.42 46.99 21.74 14.29 SOPMA
39.41 52.83 90.68 30.13 85.45 47.06 73.94 59.41 44.58 7.61 0 GOR IV
Betasheet 20 3.14 0 25 7.28 19.86 2.81 15.85 20.48 7.6 14.29 SOPMA
18.82 8.81 1.69 17.95 3.03 9.56 2.11 3.96 7.23 9.78 14.29 GOR IV
Random coil 28.82 8.81 0 36.54 15.76 38.24 11.27 25.74 32.53 70.65 71.43 SOPMA
41.76 38.36 7.63 51.92 11.52 43.38 23.94 36.63 48.19 82.61 85.71 GOR IV