Table 4. Prediction of the percentages of secondary structure components in NTDs of selected bacterial Tcps using SOPMA and GOR IV servers.
| N-TcpC | N-TIpA | N-BtpA | N-BtpB | N-PdTLP | N-YpTdp | N-TirS | N-SaTIp1 | N-HP1437 | N-TcpYI | N-TcpYIII | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Alpha helix | 41.18 | 88.05 | 100 | 38.46 | 76.97 | 41.91 | 85.92 | 58.42 | 46.99 | 21.74 | 14.29 | SOPMA |
| 39.41 | 52.83 | 90.68 | 30.13 | 85.45 | 47.06 | 73.94 | 59.41 | 44.58 | 7.61 | 0 | GOR IV | |
| Betasheet | 20 | 3.14 | 0 | 25 | 7.28 | 19.86 | 2.81 | 15.85 | 20.48 | 7.6 | 14.29 | SOPMA |
| 18.82 | 8.81 | 1.69 | 17.95 | 3.03 | 9.56 | 2.11 | 3.96 | 7.23 | 9.78 | 14.29 | GOR IV | |
| Random coil | 28.82 | 8.81 | 0 | 36.54 | 15.76 | 38.24 | 11.27 | 25.74 | 32.53 | 70.65 | 71.43 | SOPMA |
| 41.76 | 38.36 | 7.63 | 51.92 | 11.52 | 43.38 | 23.94 | 36.63 | 48.19 | 82.61 | 85.71 | GOR IV |