TABLE 3.
Results of PERMANOVA on unweighted and weighted UniFrac distances (all samples combined)
| Parameter | df | pseudo-F | R2 | P valuea |
|---|---|---|---|---|
| Unweighted UniFrac distance | ||||
| Body site | 2 | 3.703 | 0.052 | <0.001 |
| C-section | 1 | 1.987 | 0.014 | <0.01 |
| Infant age | 1 | 4.034 | 0.028 | <0.001 |
| Siblings | 1 | 1.239 | 0.009 | 0.185 |
| Household size | 6 | 1.534 | 0.064 | <0.001 |
| Alloparents | 6 | 1.598 | 0.066 | <0.001 |
| Population | 3 | 1.888 | 0.039 | <0.001 |
| Weighted UniFrac distance | ||||
| Body site | 2 | 20.337 | 0.219 | <0.001 |
| C-section | 1 | 2.334 | 0.013 | <0.05 |
| Infant age | 1 | 3.105 | 0.017 | <0.05 |
| Siblings | 1 | 1.670 | 0.009 | 0.113 |
| Household size | 6 | 1.972 | 0.064 | <0.01 |
| Alloparents | 6 | 2.003 | 0.065 | <0.01 |
| Population | 3 | 3.103 | 0.050 | <0.001 |
P values in boldface indicate significance.