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. Author manuscript; available in PMC: 2020 Nov 6.
Published in final edited form as: Stat Med. 2020 Jun 24;39(23):3059–3073. doi: 10.1002/sim.8591

TABLE 1.

Hundred and thirty-four covariates retained in the analytic dataset

X(0) : Baseline demographics
age, sex,race (6 indicators), language (4 indicators)
X˜(t) : Health care utilization during past 1 year and past 2 years
number of medical encounters, top quartile usage (yes/no), EHR data recorded, HIV counseling
Number of tests and number of positive tests in past 1 year and past 2 years
gonorrhea, chlamydia, syphilis, hepatitis B antibody, hepatitis B DNA, hepatitis C antibody, hepatitis C RNA, HIV ELISA test, HIV RNA test
Diagnoses in past 1 year, 2 years (yes/no)
syphilis, nongonococcal urethritis, herpes, anogenital warts, anorectal ulcer, pelvic inflammatory disease, venereal disease, anorexia, bulimia, eating disorder, alcohol dependence, opioid dependence, drug dependence, gonorrhea, chlamydia, syphilis, herpes, substance abuse
Prescriptions in past 1 and/or 2 years
bicillin, azithromycin, ceftriaxone, methadone, suboxone, cialis/viagra/levitra
Z(t) : Indicators of ever diagnosed for each condition listed above
Indicators of ever prescribed for each drug listed above
high risk sexual behavior, possible transgender, possible homosexual, possible transgender, possible injectable drug use, possible at risk woman, years of available data