Table 1.
Average AUC values of SEPT and SEP by training model on one cell line data and test on another cell line data in running 10 times
| Model | Test train |
GM12878 | HMEC | HUVEC | HeLa-S3 | IMR90 | K562 | NHEK |
|---|---|---|---|---|---|---|---|---|
| SEPT | GM12878 | * | 0.63 | 0.68 | 0.66 | 0.67 | 0.62 | 0.62 |
| HMEC | 0.59 | * | 0.57 | 0.61 | 0.67 | 0.56 | 0.59 | |
| HUVEC | 0.62 | 0.62 | * | 0.66 | 0.63 | 0.58 | 0.64 | |
| HeLa-S3 | 0.61 | 0.62 | 0.69 | * | 0.66 | 0.63 | 0.66 | |
| IMR90 | 0.58 | 0.65 | 0.62 | 0.59 | * | 0.56 | 0.62 | |
| K562 | 0.64 | 0.61 | 0.66 | 0.66 | 0.62 | * | 0.64 | |
| NHEK | 0.62 | 0.63 | 0.66 | 0.67 | 0.66 | 0.59 | * | |
| SEP | GM12878 | * | 0.57 | 0.62 | 0.59 | 0.57 | 0.55 | 0.55 |
| HMEC | 0.51 | * | 0.53 | 0.54 | 0.60 | 0.50 | 0.55 | |
| HUVEC | 0.59 | 0.55 | * | 0.58 | 0.57 | 0.56 | 0.55 | |
| HeLa-S3 | 0.56 | 0.56 | 0.60 | * | 0.58 | 0.54 | 0.58 | |
| IMR90 | 0.53 | 0.61 | 0.56 | 0.55 | * | 0.51 | 0.57 | |
| K562 | 0.56 | 0.53 | 0.54 | 0.53 | 0.53 | * | 0.53 | |
| NHEK | 0.53 | 0.57 | 0.56 | 0.55 | 0.56 | 0.50 | * |