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. 2020 Nov 8;4(11):e00279. doi: 10.1002/pld3.279

FIGURE 3.

FIGURE 3

Transcriptome comparisons. Hierarchical clustering was used to generate a heatmap of transcriptomes, which represent mean expression levels of the three replicates per line at each time point. (T1 = atx1,3,4 TM1, T2 = atx1,3,4 TM2). PCA was completed using the DeSeq2 package, and results for the first three principal components are shown. (Data File S3 contains the code used to generate the PCA plots).