Table 3.
Reference no. | Year | Disease or pathogen | Species | Specimen type | Index tests | References test(s) | Source population/matches purposes | Principle cited*/statistical methods |
---|---|---|---|---|---|---|---|---|
58 | 2008 | Classical swine fever virus | Wild boar | Organs (tonsil, lymph nodes, ileocecal valves, kidney, spleen), blood, viral culture | 2 RT-PCRs | Virus isolation | Mix of PT panels and field/no | Yes/none |
97 | 2008 | Anaplasma spp. | Wild ruminants | Serum | ELISA | PCR, IFA | Retrospective samples of mixed species of wild ruminants/no | No/ROC |
125 | 2009 | Trypanosoma cruzi | Raccoon, Virginia opossum | Serum | Chigas Stat-Pak | IFA | Archived samples, samples from experimental infections/no | No/point estimate with CI |
29 | 2010 | Anaplasma phagocytophilum, parvovirus | Fishers, gray foxes | Fecal samples, whole blood | SNAP-PARVO RDT | PCR, IFA | None/NA | No/point estimate with CI |
96 | 2010 | Brucella abortus | Elk | Serum | Card test, Rivanol, RAP, western blot | Bacterial culture | Some provided by collaborators with known infection/no | No/point estimate with CI |
112 | 2011 | African swine fever virus | Wild boar, domestic pigs, bush pigs, and ticks | Whole blood, serum, tissues, ticks | Real-time PCR with internal control | Virus isolation | None/NA | No/point estimate |
6 | 2012 | Chronic wasting disease: PrPCWD | Rocky Mountain elk, white-tailed deer, mule deer, roe deer, red deer, fallow deer | Brainstem (obex region) and lymph node tissues | 4 ELISAs, western blots, lateral flow test | IHC | None/NA | No/only analytical Se and Sp reported |
111 | 2012 | Chronic wasting disease | White-tailed deer | Brainstem, lymph node tissues | IHC | Rectal biopsy test results | 3 Canadian and 1 U.S. herd/confined to case herds with complete information | No/random-effects logistic regression model; Forest plots for DSe |
126 | 2012 | Rabies virus | Raccoon dogs, cattle, dogs | Brain | Virus isolation, RT-PCR, RIDA | Fluorescent antibody test | None/NA | No/point estimate |
80 | 2013 | Henipavirus | Fruit bat | Plasma | Multiplexed microsphere binding assay |
Virus neutralization | Opportunistic sampling/mixed samples | Yes/ROC, Bayesian |
84 | 2013 | MAP infection | Elk, bison, caribou | Serum | ELISA | Bacterial culture | Animals of known infectious status/mixed samples | Yes/point estimate, ROC |
106 | 2013 | Infestation of Notoedres cati (not OIE-listed) | Bobcats | Fecal samples | PCR | Clinical sign, skin scraping, fecal flotation | Bobcats in the preserve area where no significant population fluctuation/ opportunistic sampling |
No/point estimate |
118 | 2013 | Rabies virus | Red fox, racoon dog | Serum | BioPro ELISA | FAVN | Field samples and experimental infection/no | No/specificity concordance reported |
1 | 2014 | Toxoplasma gondii | Gray seal | Serum | ELISAs, western blot | Not applied | None/NA | Yes/relative values reported |
21 | 2014 | Trichinella infection | Wild boar | Serum | ELISAs, western blot | Artificial digestion | Low- and high-risk groups/no | No/only kappa |
83 | 2014 | MAP | Fallow deer | Serum | ELISAs | Histopathology, culture | Samples from a 500-deer population/partial | Yes/ROC, kappa |
13 | 2015 | Sarcoptes scabiei | Experimentally infected, farmed, and wild rabbits | Serum | ELISA | Skin scraping | Wild rabbits from Mallorca Island/no | No/point estimate |
31 | 2015 | African swine fever virus | Wild boars | Tissues, bone marrow, whole blood, serum | PCRs, ELISA | Virus isolation | Infection-status known animals/no | No/point estimate |
38 | 2015 | Brucellosis | African buffalo | Serum | ELISA, RBT, CFT | RBT, CFT | Herd from Kruger National Park/partial | Yes/Bayesian modeling |
41 | 2015 | Sarcoptes scabiei | Wild boars | Serum | ELISA | Skin scraping | Wild boar from Petite Pierre National Reserve/repeatable sampling on same animals | Yes/point estimate |
117 | 2015 | Toxoplasma gondii | Wild boars | Serum | ELISA | None | Wild boar population in Sweden/random selection from national surveillance program | Yes/Bayesian latent class analysis |
23 | 2016 | Leishmania infantum | Rabbit, hares | Serum, skin | IFATs, PCR | None | Lagomorphs in 2 areas of the region of Madrid/partial | Yes/Bayesian approach |
48 | 2016 | Tick-borne encephalitis virus | Wild rodents | Serum | ELISA, PCR | Neutralization test | Mixed samples/no | No/point estimate |
86 | 2016 | Sarcoptes scabiei | Iberian ibex | Serum | ELISA | Categorization of scabietic skin lesion | Iberian ibexes from Sierra Nevada Natural and National Parks/convenience sampling | No/ROC curve |
94 | 2016 | African swine fever virus | Wild boar | Serum | Lateral flow assay | PCR, antigen-detection ELISA | Mixed samples/no | No/point estimate |
44 | 2016 | Bluetongue | Bovine/ovine/caprid | Serum | Lateral flow assay, PCR | Antibody-ELISA | Mixed samples/no | Yes/point estimate |
12 | 2017 | African swine fever virus | Wild boar | Serum, lung | Pen-side rapid test | IPMA, ELISA | Wild boar on island of Sardinia, Italy/yes | No/ROC curve |
28 | 2017 | Epizootic hemorrhagic disease | Impala, dromedary camel | Serum | ELISA | Virus isolation | Infectious-status known samples/no | No/point estimate |
59 | 2017 | Bovine spongiform encephalopathies | Macaques, human, cattle | Brain | RT-QuIC | Western blot | None/NA | No/point estimate |
110 | 2017 | Hemorrhagic septicemia | Asian elephants | Serum | ELISA, IHA | None | Archived samples/no | Yes/Bayesian approach |
CFT = complement fixation test; FAVN = fluorescent antibody virus neutralization test; IHA = indirect hemagglutination assay; IHC = immunohistochemistry; IPMA = immunoperoxidase monolayer assay; NA = not applicable (when source population is not stated, it is not appropriate to assess whether the source population matches the study purpose); MAP = Mycobacterium avium subsp. paratuberculosis; PT = proficiency test; RBT = Rose Bengal test; RIDA = rapid immunodiagnostic assay; RT-QuIC = real-time quaking-induced conversion assay.