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. 2020 Nov 9;22(2):71–88. doi: 10.1038/s41576-020-00292-x
Resource URL Ref.
Functional annotations
Gene Ontology http://geneontology.org/ 167
UniProt https://www.uniprot.org/ 168
KEGG https://www.genome.jp/kegg/ 169
Orthologues
OrthoDB https://www.orthodb.org/ 170
gProfiler https://biit.cs.ut.ee/gprofiler/orth 171
Databases of protein–protein interactions
The Human Protein Atlas https://www.proteinatlas.org/ 172
STRING https://string-db.org/ 173
BioGRID https://thebiogrid.org/ 174
PICKLE http://www.pickle.gr 175
APID http://apid.dep.usal.es 176
IntAct https://www.ebi.ac.uk/intact 177
Pathway Commons http://www.pathwaycommons.org/ 178
Ligand–receptor interactions
IUPHAR/BPS Guide to Pharmacology https://www.guidetopharmacology.org/ 179
Resources for cell–cell interactions from the Bader laboratory http://baderlab.org/CellCellInteractions 32
Compendium of ligand–receptor pairs in the literature https://github.com/LewisLabUCSD/Ligand-Receptor-Pairs 10.1038/s41576-020-00292-x