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. 2020 Sep 4;19:303. doi: 10.1186/s12936-020-03366-7

Table 1.

Genetic polymorphism and tests of neutrality in the N-terminal and C-terminal regions of Myanmar pvcsp

Variant Region n K S Eta H Hd ± SD π ± SD dN-dS Tajima’s DP value Fu and Li’s DP value Fu and Li’s FP value
VK210 N-terminal 143 0.098 5 6 7 0.096 ± 0.034 0.0024 ± 0.0009 0.0008 − 1.9359c − 3.9086b − 3.8409b
C-terminal 143 0.209 10 11 11 0.186 ± 0.044 0.0035 ± 0.0009 −0.0035 − 2.2251d − 3.5089b − 3.6329b
VK247 N-terminal 28 0.405 1 2 3 0.405 ± 0.094 0.0090 ± 0.0021 0.0117 − 0.4445a − 0.7114a − 0.7369a
C-terminal 28 0.495 6 6 6 0.331 ± 0.114 0.0067 ± 0.0027 − 0.0150 − 1.9719c − 2.5946c − 2.8039c

n number of analysed sequences, K average number of nucleotide differences, S number of segregating sites, Eta total number of mutations, H number of haplotypes, Hd haplotype diversity, π observed average pairwise nucleotide diversity, SD standard deviation, dN rate of non-synonymous mutations, dS rate of synonymous mutations

aP > 0.1

bP < 0.02

cP < 0.05

dP < 0.01