Table 2.
Region | Country | n | K | S | Eta | H | Hd ± SD | π ± SD | dN-dS | Tajima’s DP value | Fu and Li’s DP value | Fu and Li’s FP value |
---|---|---|---|---|---|---|---|---|---|---|---|---|
N-terminal | Myanmar | 143 | 0.098 | 5 | 6 | 7 | 0.096 ± 0.034 | 0.0024 ± 0.0009 | 0.0008 | − 1.9359c | − 3.9086b | − 3.8409b |
Cambodia | 31 | 0.125 | 1 | 1 | 2 | 0.125 ± 0.077 | 0.0030 ± 0.0018 | 0.0039 | − 0.7737a | 0.5907a | 0.2450a | |
India | 79 | 1.972 | 23 | 28 | 28 | 0.661 ± 0.063 | 0.0470 ± 0.0074 | − 0.0909 | − 2.0261c | − 1.3952a | − 1.9514e | |
Iran | 39 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
South Korea | 39 | 0.051 | 1 | 1 | 2 | 0.051 ± 0.048 | 0.0012 ± 0.0011 | 0.0016 | − 1.1264a | − 1.7662a | − 1.8293a | |
Brazil | 41 | 0.049 | 1 | 1 | 2 | 0.049 ± 0.046 | 0.0012 ± 0.0011 | − 0.0059 | − 1.1219a | − 1.7816a | − 1.8406a | |
Mexico | 11 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
Sudan | 30 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
Vanuatu | 21 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
C-terminal | Myanmar | 143 | 0.209 | 10 | 11 | 11 | 0.186 ± 0.044 | 0.0035 ± 0.0009 | − 0.0035 | − 2.2251d | − 3.5089b | − 3.6329b |
Cambodia | 31 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
India | 79 | 0.276 | 8 | 9 | 6 | 0.123 ± 0.051 | 0.0043 ± 0.0020 | − 0.0149 | − 2.1953d | − 4.4419b | − 4.3524b | |
Iran | 39 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
South Korea | 39 | 0.103 | 2 | 2 | 3 | 0.101 ± 0.065 | 0.0008 ± 0.0005 | − 0.0037 | − 1.4889a | − 2.4148e | − 2.4864e | |
Brazil | 41 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
Mexico | 11 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
Sudan | 30 | 0.067 | 1 | 1 | 2 | 0.067 ± 0.061 | 0.0009 ± 0.0008 | − 0.0041 | − 1.1470a | − 1.6821a | − 1.7655a | |
Vanuatu | 21 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
n number of analysed sequences, K avarage number of nucleotide differences, S number of segregating sites, Eta total number of mutations, H number of haplotypes, Hd haplotype diversity, π observed average pairwise nucleotide diversity, SD standard deviation, dN rate of non-synonymous mutations, dS rate of synonymous mutations
aP > 0.1
bP < 0.02
cP < 0.05
dP < 0.01
e0.05 < P < 0.1