Table 3.
Region | Country | n | K | S | Eta | H | Hd ± SD | π ± SD | dN-dS | Tajima’s DP value | Fu andLi’s DP value | Fu and Li’s FP value |
---|---|---|---|---|---|---|---|---|---|---|---|---|
N-terminal | Myanmar | 28 | 0.405 | 1 | 2 | 3 | 0.405 ± 0.094 | 0.0090 ± 0.0021 | 0.0117 | − 0.4445a | − 0.7114a | − 0.7369a |
Cambodia | 10 | 0.2 | 1 | 1 | 2 | 0.200 ± 0.154 | 0.0029 ± 0.0022 | 0.0038 | − 1.1117a | − 1.2434a | − 1.3467a | |
Iran | 11 | 1.309 | 3 | 3 | 2 | 0.436 ± 0.133 | 0.0190 ± 0.0058 | − 0.0543 | 0.9518a | 1.1271a | 1.2185a | |
Mexico | 8 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
Colombia | 25 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
C-terminal | Myanmar | 28 | 0.495 | 6 | 6 | 6 | 0.331 ± 0.114 | 0.0067 ± 0.0027 | − 0.0150 | − 1.9719c | − 2.5946c | − 2.8039c |
Cambodia | 10 | 0.400 | 2 | 2 | 2 | 0.200 ± 0.154 | 0.0039 ± 0.0030 | − 0.0172 | − 1.4009a | − 1.5866a | − 1.7190a | |
Iran | 11 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
Mexico | 8 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | |
Colombia | 25 | 0.500 | 2 | 2 | 3 | 0.44 ± 0.095 | 0.0039 ± 0.0010 | 0.0017 | − 0.1215a | − 0.6754a | − 0.6012a |
n number of analysed sequences, K average number of nucleotide differences, S number of segregating sites, Eta total number of mutations, H number of haplotypes, Hd haplotype diversity, π observed average pairwise nucleotide diversity, SD standard deviation, dN rate of non-synonymous mutations, dS rate of synonymous mutations
aP > 0.1
bP < 0.02
cP < 0.05
dP < 0.01
e0.05 < P < 0.1