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. 2020 Oct 27;11:560332. doi: 10.3389/fmicb.2020.560332

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Copyright © 2020 Misas, Chow, Gómez, Muñoz, McEwen, Litvintseva and Clay.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Alignment of the complete mitochondrial genomes of C. auris and Clavispora lusitaniae, obtained using Mauve (Darling et al., 2010). The mitochondrial genome assembly of the clade I isolate B8441 from Pakistan, sequenced on PacBio RS II (top), and the genome assembly of Clavispora lusitaniae KC993186 (bottom) are shown. The colored big boxes represent Locally Collinear Blocks (LCBs), i.e., conserved segments that appear to be internally free from genome rearrangements. The order of the LCBs is given by the original coordinates of the sequences specified by the assembly program and the coordinates in the previously reported sequences when they are presented as a linear sequence. The plot inside the boxes represents the local quality of the alignment. The small boxes represent the genes, protein coding genes are shown in white, ribosomal genes and tRNAs are shown in red and green respectively.