Table 1.
Virus | Target region | Nucleotide | Primers | Sequences | Fragment length |
---|---|---|---|---|---|
HERV-H* (23) | env | 5388–5407 | HERV-H Fw | 5′-TTC ACT CCA TCC TTG GCT AT-3′ | 129 |
5498–5517 | HERV-H Rev | 5′-CGT CGA GTA TCT ACG AGC AAT-3′ | |||
HERV-K§ | env | 93656–93675 | HERV-K Fw | 5′-CAC AAC TAA AGA AGC TGA CG-3′ | 167 |
93804–93823 | HERV-K Rev | 5′-CAT AGG CCC AGT TGG TAT AG-3′ | |||
HERV-K# (24) | pol | 4212–4232 | HERV-K-pol Fw | 5′-ATC CCA AAA GAT TGG CCT TTA-3′ | 166 |
4357–4378 | HERVK-pol Rev | 5′-TTA AGC ATT CCC TGA GGT AAC A-3′ | |||
HERV-P∧ | env | 364–382 | HERV-P Fw | 5′-CAA GAT TGG GTC CCC TCA C-3′ | 208 |
554–572 | HERV-P Rev | 5′-CCT ATG GGG TCT TTC CCT C-3′ |
HERV-H env: 100% similarity with Chr.2q24.3.
HERV-K env: 100% similarity with Chr.12q14.1, and 6q14.1.
HERV-K pol: 100% similarity with Chr. 1q22/23.3; 3q27.2/24/13.2; 5q33.3;5p13.3; 6q14.1; 7q22.2; 7p22.1a/1b; 8q24.3c; 11q22.1; 12q14.1; 19q11; 19p12b/12d/12e; Xq21.33.
HERV-P env: 100% similarity with Chr.14q32.12.