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. 2020 Oct 27;11:583182. doi: 10.3389/fneur.2020.583182

Table 1.

Allele frequencies and bioinformatic predictions of the NUS1 c.537T>A variant.

Variant Zygosity dbSNP154 rs number Allele frequencies Bioinformatic predictions
Nucleotide change Amino acid change 1,000 Genomes Project ExAC gnomAD MutationTaster SIFT PROVEAN PANTHER PolyPhen-2
c.537T>A p.Asp179Glu Heterozygote rs28362519 2 × 10−3 6.802 × 10−4 6.824 × 10−4 Disease causing Tolerated Neutral Probably benign Benign

dbSNP154, Single Nucleotide Polymorphism Database version 154; rs, Reference SNP; ExAC, Exome Aggregation Consortium; gnomAD, Genome Aggregation Database; SIFT, Sorting Intolerant from Tolerant; PROVEAN, Protein Variation Effect Analyzer; PANTHER, Protein Analysis Through Evolutionary Relationships; PolyPhen-2, Polymorphism Phenotyping version 2.