Table 2.
Details of discovered rare missense mutations and in silico analyses.
| Chr | Positiona | dbSNP IDb | Transcript variant | Protein variant | SCZ (n = 370) | ASD (n = 192) | our cohort MAFc | gnomADc,d | ESPc | jMorp (4.7KJPN) | HGVD Frequency | In silico analysis | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SIFT | PolyPhen-2 | ||||||||||||
| 1 | 57480856 | rs915578825 | c.1144 G > T | p.G382C | 1 F | 0 | 1/1124 | – | – | – | – | Damaging | Probably Damaging |
| 1 | 57538009 | rs755758685 | c.385 G > A | p.V129I | 1 M | 0 | 1/1124 | 4/251140 | – | 0.0008 | 0.0009 | Damaging | Probably Damaging |
Chr Chromosome, SCZ schizophrenia, ASD autism spectrum disorders, MAF minor allele frequency, gnomAD Genome Aggregation Database, ESP Exome Sequencing Project, jMorp Japanese Multi Omics Reference Panel, HGVD Human Genetic Variation Database, F Female, M Male.
aGenomic position based on NCBI builds GRCh 37 (Transcript ID ENST00000371236.2).
bdbSNP Build 154.
cminor allele count/total allele count.
dgnomAD v2.1.1.