Table 2.
Reference-based and de novo enterotypes among 46 participants receiving outpatient addiction treatment, 2016–2017.
| Reference-based enterotypes (Method: PAM) | De novo assigned enterotypes (Method: DMM) | |||
|---|---|---|---|---|
|
Bacteroides: Faec n (%) |
Bacteroides: Clost n (%) |
Prevotella n (%) |
Total n (%) |
|
| Bacteroides | 22 (91.7) | 9 (81.8) | 0 (0) | 31 (67.4) |
| Firmicutes | 0 (0) | 0 (0) | 0 (0) | 0 (0) |
| Prevotella | 2 (8.3) | 0 (0) | 11 (100) | 13 (28.3) |
| Unable to be assigned | 0 (0) | 2 (18.2) | 0 (0) | 2 (4.3) |
| Total | 24 (100) | 11 (100) | 11 (100) | 46 (100) |
DMM Dirichlet multinomial mixture model, PAM partitioning around medoid clustering, n number.