Table 3.
Composition of the microbiome (Phylum, Class and Order of bacteria) identified in four samples of fecal DNA related to piglet diarrhea and curing.
| Sample | Phylum | Class | Order |
|---|---|---|---|
|
Group I Healthy |
Actinobacteria Bacteroidetes Firmicutes Planctomycetes Proteobacteria Spirochaetes Verrucomicrobiota |
Actinobacteria Bacilli Bacteroidia Clostridia Coriobacteriia Erysipelotrichi Mollicutes Planctomycetia Spirochaetes Verruchomicrobiae |
Bacillales Bacteroidales Bifidobacteriales Clostridiales Coriobacteriales Erysipelotrichales Lactobacillales** Pirellulales RF39 Spirochaetales** Unclassified Others |
|
Group II Microecosystem |
Bacteroidetes Firmicutes Proteobacteria Spirochaetes Tenericutes Verrucomicrobiota |
Bacilli Bacteroidia Betaproteobacteria Clostridia Erysipelotrichi Gammaproteobacteria* Mollicutes Planctomycetia Spirochaetes Verruco-5 Verruchomicrobiae |
Bacillales Bacteroidales Burkholderiales Clostridiales Erysipelotrichales Lactobacillales** Pirellulales RF39 Spirochaetales** Verrucomicrobialles WCHB1-41 Unclassified Others |
|
Group III Diarrhea |
Bacteroidetes Firmicutes Fusobacteria Proteobacteria |
Bacteroidia Betaproteobacteria Clostridia Deltaproteobacteria Epsilonproteobacteria Fusobacteria |
Bacteroidales Burkholderiales Campylobacterales Clostridiales Desulfovibrionales Enterobacteriales Erysipelotrichales Fusobacteriales Others |
|
Group IV Antibiotics |
Bacteroidetes Firmicutes Proteobacteria |
Bacilli Bacteroidia Betaproteobacteria Clostridia Deltaproteobacteria Erysipelotrichi Fusobacteria Gammaproteobacteria* Spirochaetes |
Bacillales Bacteroidales Campylobacterales Clostridiales Coriobacteriales Desulfovibrionales Enterobacteriales Erysipelotrichales Fusobacteriales Lactobacillales** Spirochaetales** Unclassified Others |
The most abundant bacteria in the sample or group of piglets are shown in bold. Single asterisk (*) shows bacterial classes increased in both antibiotics and microecosystem groups. Double asterisk (**) shows bacterial orders present in healthy piglets and increased in both antibiotics and microecosystem groups.