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. 2020 Nov 11;26(12):338. doi: 10.1007/s00894-020-04599-8

Table 3.

The average RMSD for backbone and C-alpha trace, RMSF, and average H-bonds formed between protein and compound across simulations for all the complexes over 3 replicates of 100-ns molecular dynamics simulations

Complex RMSD Backbone (Å) RMSD C-alpha (Å) RMSF (Å) Average H-bonds formed
ACE2:Andrographolide 1.95 ± 0.19 1.99 ± 0.21 1.39 ± 0.11 2.97 ± 0.15
ACE2:Artemesinin 2.80 ± 0.31 2.89 ± 0.34 1.72 ± 0.20 1.62 ± 0.48
ACE2:Pterostilbene 1.96 ± 0.18 2.04 ± 0.14 1.41 ± 0.15 2.93 ± 0.14
ACE2:Resveratrol 2.45 ± 0.24 2.49 ± 0.28 1.53 ± 0.19 2.24 ± 0.31