TABLE 2.

ANOSIM results in order by descending R statistic^a

R statistic	Level	Variable	P	Padj
0.651	Family	Type	0.001	0.008
0.551	Genus	Type	0.001	0.013
0.514	Carbs	Type	0.001	0.004
0.436	Species	Type	0.001	0.050
0.345	Superfocus level 3	Type	0.001	0.004
0.289	Superfocus level 1	Type	0.001	0.005
0.280	Phylum	Type	0.001	0.006
0.221	Carbs	Producer	0.001	0.004
0.210	Superfocus level 2	Type	0.001	0.005
0.202	Family	Fermentation	0.001	0.006
0.171	Species	Fermentation	0.001	0.017
0.169	Species	State	0.001	0.025
0.167	Family	State	0.001	0.007
0.163	AMR	Type	0.004	0.010
0.160	Species	Producer	0.003	0.008
0.154	Carbs	Fermentation	0.001	0.003
0.149	Genus	Fermentation	0.001	0.010
0.117	Superfocus level 1	State	0.002	0.006
0.111	Superfocus level 3	Fermentation	0.002	0.006
0.106	AMR	Fermentation	0.005	0.012
0.097	Genus	State	0.007	0.015
0.094	Superfocus level 3	State	0.006	0.013
0.093	Superfocus level 1	Fermentation	0.002	0.006
0.080	Superfocus level 2	Fermentation	0.006	0.014
0.076	Superfocus level 2	State	0.012	0.024
0.073	Carbs	State	0.019	0.035
0.070	Bacteriocin	State	0.018	0.035

^aOnly results that remained significant (P < 0.05) after Benjamini-Hochberg corrections (i.e., Benjamini-Hochberg adjusted P values [P_adj]) are included here (see the full table in Data Set S1, sheet 8). AMR, antimicrobial resistance; Carbs, carbohydrates.