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. 2020 Oct;11(5):932–951. doi: 10.21037/jgo-20-208

Table 2. The functions of CBXs and genes significantly associated with CBX alterations were predicted by the analysis of pathway in regulating gastric cancer.

Category Term Count P value/false discovery rate Genes
KEGG_Pathway Systemic lupus erythematosus 5 P=1.61E-05 HIST4H4, HIST1H4A, HIST1H4E, H3F3A, HIST1H4F
Signaling pathways regulating pluripotency of stem cells 5 P=1.91E-05 BMI1, PCGF5, PCGF2, PCGF6, PCGF1
Alcoholism 5 P=4.83E-05 HIST4H4, HIST1H4A, HIST1H4E, H3F3A, HIST1H4F
Viral carcinogenesis 4 P=0.001918327 HIST4H4, HIST1H4A, HIST1H4E, HIST1H4F
Reactome_Pathway RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known 4 False discovery rate =2.90E-08 CBX2, CBX4, CBX6, CBX8
SUMOylation of chromatin organization proteins 4 False discovery rate =6.00E-08 CBX2, CBX4, CBX5, CBX8
Regulation of PTEN gene transcription 4 False discovery rate =6.98E-08 CBX2, CBX4, CBX6, CBX8
Oxidative Stress Induced Senescence 4 False discovery rate =2.83E-07 CBX2, CBX4, CBX6, CBX8
SUMOylation of DNA methylation proteins 3 False discovery rate =2.83E-07 CBX2, CBX4, CBX8
SUMOylation of transcription cofactors 3 False discovery rate =1.83E-06 CBX2, CBX4, CBX8
SUMOylation of RNA binding proteins 3 False discovery rate =1.83E-06 CBX2, CBX4, CBX8
Generic Transcription Pathway 6 False discovery rate =2.07E-06 CBX2, CBX3, CBX4, CBX5, CBX6, CBX8
SUMOylation of DNA damage response and repair proteins 3 False discovery rate =5.11E-06 CBX2, CBX4, CBX8
Transcriptional Regulation by E2F6 2 False discovery rate =0.00012 CBX3, CBX5