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. 2020 Oct 14;287(1936):20201526. doi: 10.1098/rspb.2020.1526

Table 1.

Parameters for equations (2.1)–(2.5). (Our mechanistic susceptible–infected model (equations (2.1)–(2.4)) and corresponding expression for the basic reproduction number (R0; equation (2.5)) contains 13 parameters, of which six are temperature-dependent arising from four thermal functions (figure 1). We incorporated the thermal dependency of the temperature-dependent parameters using the MTE relationships that were previously determined from experimental data on individual hosts in Kirk et al. [29,30].)

temperature-independent parameters
parameter description source value
ϕS input of susceptibles methods used in this study 3.535 day−1
ϕI input of infecteds methods used in this study 0.465 day−1
K adult density-dependent recruitment constraint abundance measured in this study 170
ψ maximum per capita recruitment assumed (such that abundance remains constant near K) 1.33 day−1
h harvesting methods used in this study 0.0235 day−1
γ environmental spore mortality experimental medium removal rate used in this study 0.0286 day−1
θ corpse degradation average from degradation experiment 0.1 day−1
temperature-dependent parameters
parameter description source function  unit
μ(T) natural mortality rate [29] Sharpe–Schoolfielda,b day−1
χ(T) contact rate [30] Sharpe–Schoolfielda day−1
σ(T) probability of infection [30] Sharpe–Schoolfielda,b
λ(T) parasite shedding rate [29] Sharpe–Schoolfielda,c day−1
α(T) parasite-induced mortality rate [29] Sharpe–Schoolfielda,c day−1
ω(T) parasite intensity at host death [29] Sharpe–Schoolfielda,c

aSee figure 1 for functional forms.

bNatural mortality rate and probability of infection were determined by underlying expressions which use Sharpe–Schoolfield functions (see the electronic supplementary material for more details).

cThe model parameters shedding rate, parasite-induced mortality rate and parasite intensity at death were each modelled as proportional to within-host infection intensity, which is modelled using a Sharpe–Schoolfield function.