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. 2020 Nov 12;18:3402–3414. doi: 10.1016/j.csbj.2020.11.002

Table 2.

Iinterface residues of cRBD with anti-SARS mAbs.

mAB Type cRBD scFv Bond Ekcal/mol Dist Å Atom
m396 VH Thr169 Ser31 H −2.00 2.73 b-
Gly171 Thr33 H −2.30 2.94 -b
Asp74 Asn58 H −3.10 2.77
Gln175 Val97 H −4.00 2.92 b-
VL Thr45 Ser93 H −1.70 2.76
Arg77 Ser94 H −1.10 3.21 b-
Arg77 Asp95 IH −19.24 2.89
F26G19 VH Ser44 Thr31 H −1.50 2.80 -b
Ser44 Tyr52 H −1.60 2.93
Asn106 Tyr52 A −1.20 4.05
Asn106 Asn54 H −4.20 2.74 -b
Asn108 Asp56 H −6.70 2.99
Asn109 Asp56 H −6.00 2.97
Val172 Gln95 H −0.80 3.02 -b
VL Gly171 Val92 H −1.00 3.11 bb
Thr169 Tyr94 H −5.10 2.88 bb
80R VH Gly165 Ser101 H −1.70 2.81 b-
Tyr174 Arg100 H −0.50 3.12
VL Val114 Trp226 A −0.50 4.51
Asn119 Arg162 H −11.70 2.83
Gly154 Thr206 H −3.20 2.74 b-
Cys157 Ser197 H −3.00 2.70 b-
Gln162 Thr185 H −2.10 2.77
s230 VH Gln162 Arg54 H −2.70 2.87
Phe125 Asn55 A −0.80 4.61
Asn156 Asp60 H −3.30 2.82
Cys157 Lys63 H −2.80 3.58
Leu124 Tyr104 H −3.10 2.62 -b
Tyr90 Tyr104 A −0.00 3.91

VH, variable heavy chain; VL, variable light chains; H, hydrogen bond; A, aromatic bond; I, ionic (electrostatic) bond; bb, backbone atoms. Residue numbers of the cRBD should be tallied with the top numbers in Fig. 2A.